ENST00000449317.6 CLEC18A

Information
Transcript ID
ENST00000449317.6
Genome
hg19
Position
chr16:69,985,136-69,997,887
Strand
+
CDS length
1,368
Amino acid length
456
Gene symbol
CLEC18A
Gene type
protein-coding
Gene description
C-type lectin domain family 18 member A
Gene Entrez Gene ID
348174
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 69,985,136 69,985,393
2 69,985,938 69,986,029
3 69,988,237 69,988,476
4 69,992,845 69,992,942
5 69,993,363 69,993,484
6 69,993,642 69,993,749
7 69,994,276 69,994,368
8 69,994,748 69,994,854
9 69,995,489 69,995,618
10 69,995,891 69,995,987
11 69,996,643 69,996,669
12 69,996,879 69,996,970
13 69,997,477 69,997,887
CDS
Exon number Type Start Stop
1 CDS 69,985,270 69,985,393
2 CDS 69,985,938 69,986,029
3 CDS 69,988,237 69,988,476
4 CDS 69,992,845 69,992,942
5 CDS 69,993,363 69,993,484
6 CDS 69,993,642 69,993,749
7 CDS 69,994,276 69,994,368
8 CDS 69,994,748 69,994,854
9 CDS 69,995,489 69,995,618
10 CDS 69,995,891 69,995,987
11 CDS 69,996,643 69,996,669
12 CDS 69,996,879 69,996,970
13 CDS 69,997,477 69,997,514
Other genome
Genome Chromosome Start End Links
hg38 chr16 69,951,233 69,963,984 Link
CDS sequence
ATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCATCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGGCTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGGGTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGCAGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGCAGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGCCACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCAGAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCCAGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCATGAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGATACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGTTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGACATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTGACCTGAGGATCGACGGAGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGTCAGAGGAAAGGCGGGGTGCTGGCCCAGATCAAGAGCCAGAAAGTGCAGGACATCCTCGCCTTCTATCTGGGCCGCCTGGAGACCACCAACGAGGTGATTGACAGTGACTTCGAGACCAGGAACTTCTGGATCGGGCTCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCTTCACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGCTGGTGTGGCTGAGTGCTGCCATGGGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCAGCTGCCTTCAACTGGAACGACCAGCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACATCTCCCGGTGGGGCCCAGGGTCCTGA
Amino sequence
MLHPETSPGRGHLLAVLLALLGTAWAEVWPPQLQEQAPMAGALNRKESFLLLSLHNRLRSWVQPPAADMRRLDWSDSLAQLAQARAALCGTPTPSLASGLWRTLQVGWNMQLLPAGLVSFVEVVSLWFAEGQRYSHAAGECARNATCTHYTQLVWATSSQLGCGRHLCSAGQAAIEAFVCAYSPRGNWEVNGKTIVPYKKGAWCSLCTASVSGCFKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHCHCPPGYTGRYCQVRCSLQCVHGRFREEECSCVCDIGYGGAQCATKVHFPFHTCDLRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYLGRLETTNEVIDSDFETRNFWIGLTYKTAKDSFRWATGEHQAFTSFAFGQPDNHGLVWLSAAMGFGNCVELQASAAFNWNDQRCKTRNRYICQFAQEHISRWGPGS*