ENST00000566177.5 LAT

Information
Transcript ID
ENST00000566177.5
Genome
hg19
Position
chr16:28,996,739-29,001,333
Strand
+
CDS length
786
Amino acid length
262
Gene symbol
LAT
Gene type
protein-coding
Gene description
linker for activation of T cells
Gene Entrez Gene ID
27040
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,996,739 28,996,838
2 28,997,034 28,997,061
3 28,997,175 28,997,209
4 28,997,456 28,997,537
5 28,997,706 28,997,767
6 28,997,861 28,998,035
7 28,998,120 28,998,214
8 29,000,848 29,000,910
9 29,001,095 29,001,160
10 29,001,254 29,001,333
CDS
Exon number Type Start Stop
1 CDS 28,996,739 28,996,838
2 CDS 28,997,034 28,997,061
3 CDS 28,997,175 28,997,209
4 CDS 28,997,456 28,997,537
5 CDS 28,997,706 28,997,767
6 CDS 28,997,861 28,998,035
7 CDS 28,998,120 28,998,214
8 CDS 29,000,848 29,000,910
9 CDS 29,001,095 29,001,160
10 CDS 29,001,254 29,001,333
Other genome
Genome Chromosome Start End Links
hg38 chr16 28,985,418 28,990,012 Link
CDS sequence
ATGGAGGAGGCCATCCTGGTCCCCTGCGTGCTGGGGCTCCTGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTCCTACGACAGCACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCACACGGTTGCCCCCTGGCCACCTGCCTACCCACCTGTCACCTCCTACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATCCCATCCCCGCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCTACGAGAACGAGGGTGCGTCTGGGATCCGAGGTGCCCAGGCTGGGTGGGGAGTCTGGGGTCCGTCCTGGACTAGGCTGACCCCTGTGTCGTTACCCCCAGAACCAGCCTGTGAGGATGCGGATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGGTGCTTCCTGACAGCACCCCGGCCACTAGCACTGCTGCCCCATCAGCTCCTGCACTCAGCACCCCTGGCATCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATGATTACGTGAACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACTGA
Amino sequence
MEEAILVPCVLGLLLLPILAMLMALCVHCHRLPGSYDSTSSDSLYPRGIQFKRPHTVAPWPPAYPPVTSYPPLSQPDLLPIPSPQPLGGSHRTPSSRRDSDGANSVASYENEGASGIRGAQAGWGVWGPSWTRLTPVSLPPEPACEDADEDEDDYHNPGYLVVLPDSTPATSTAAPSAPALSTPGIRDSAFSMESIDDYVNVPESGESAEASLDGSREYVNVSQELHPGAAKTEPAALSSQEAEEVEEEGAPDYENLQELN*