ENST00000360872.9 LAT
Information
- Transcript ID
- ENST00000360872.9
- Genome
- hg19
- Position
- chr16:28,996,661-29,002,094
- Strand
- +
- CDS length
- 789
- Amino acid length
- 263
- Gene symbol
- LAT
- Gene type
- protein-coding
- Gene description
- linker for activation of T cells
- Gene Entrez Gene ID
- 27040
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 28,996,661 | 28,996,838 |
| 2 | 28,997,034 | 28,997,061 |
| 3 | 28,997,175 | 28,997,209 |
| 4 | 28,997,456 | 28,997,537 |
| 5 | 28,997,703 | 28,997,767 |
| 6 | 28,997,861 | 28,998,035 |
| 7 | 28,998,120 | 28,998,214 |
| 8 | 29,000,848 | 29,000,910 |
| 9 | 29,001,095 | 29,001,160 |
| 10 | 29,001,254 | 29,001,340 |
| 11 | 29,001,510 | 29,002,094 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 28,996,739 | 28,996,838 |
| 2 | CDS | 28,997,034 | 28,997,061 |
| 3 | CDS | 28,997,175 | 28,997,209 |
| 4 | CDS | 28,997,456 | 28,997,537 |
| 5 | CDS | 28,997,703 | 28,997,767 |
| 6 | CDS | 28,997,861 | 28,998,035 |
| 7 | CDS | 28,998,120 | 28,998,214 |
| 8 | CDS | 29,000,848 | 29,000,910 |
| 9 | CDS | 29,001,095 | 29,001,160 |
| 10 | CDS | 29,001,254 | 29,001,333 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 28,985,340 | 28,990,773 | Link |
CDS sequence
ATGGAGGAGGCCATCCTGGTCCCCTGCGTGCTGGGGCTCCTGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTCCTACGACAGCACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCACACGGTTGCCCCCTGGCCACCTGCCTACCCACCTGTCACCTCCTACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATCCCAAGATCCCCGCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCTACGAGAACGAGGGTGCGTCTGGGATCCGAGGTGCCCAGGCTGGGTGGGGAGTCTGGGGTCCGTCCTGGACTAGGCTGACCCCTGTGTCGTTACCCCCAGAACCAGCCTGTGAGGATGCGGATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGGTGCTTCCTGACAGCACCCCGGCCACTAGCACTGCTGCCCCATCAGCTCCTGCACTCAGCACCCCTGGCATCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATGATTACGTGAACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACTGA
Amino sequence
MEEAILVPCVLGLLLLPILAMLMALCVHCHRLPGSYDSTSSDSLYPRGIQFKRPHTVAPWPPAYPPVTSYPPLSQPDLLPIPRSPQPLGGSHRTPSSRRDSDGANSVASYENEGASGIRGAQAGWGVWGPSWTRLTPVSLPPEPACEDADEDEDDYHNPGYLVVLPDSTPATSTAAPSAPALSTPGIRDSAFSMESIDDYVNVPESGESAEASLDGSREYVNVSQELHPGAAKTEPAALSSQEAEEVEEEGAPDYENLQELN*