ENST00000268231.13 SEPTIN12
Information
- Transcript ID
- ENST00000268231.13
- Genome
- hg19
- Position
- chr16:4,827,607-4,838,346
- Strand
- -
- CDS length
- 1,077
- Amino acid length
- 359
- Gene symbol
- SEPTIN12
- Gene type
- protein-coding
- Gene description
- septin 12
- Gene Entrez Gene ID
- 124404
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 4,827,607 | 4,827,999 |
| 9 | 4,828,087 | 4,828,138 |
| 8 | 4,829,691 | 4,829,787 |
| 7 | 4,833,463 | 4,833,558 |
| 6 | 4,833,650 | 4,833,767 |
| 5 | 4,833,932 | 4,834,069 |
| 4 | 4,835,808 | 4,835,889 |
| 3 | 4,835,981 | 4,836,106 |
| 2 | 4,837,481 | 4,837,668 |
| 1 | 4,838,281 | 4,838,346 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 4,827,798 | 4,827,999 |
| 9 | CDS | 4,828,087 | 4,828,138 |
| 8 | CDS | 4,829,691 | 4,829,787 |
| 7 | CDS | 4,833,463 | 4,833,558 |
| 6 | CDS | 4,833,650 | 4,833,767 |
| 5 | CDS | 4,833,932 | 4,834,069 |
| 4 | CDS | 4,835,808 | 4,835,889 |
| 3 | CDS | 4,835,981 | 4,836,106 |
| 2 | CDS | 4,837,481 | 4,837,646 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 4,777,606 | 4,788,345 | Link |
CDS sequence
ATGGACCCCCTGAGGCGCTCCCCCTCTCCCTGCCTGTCCTCGCAGCCCTCCAGCCCCAGCACCCCACCCTGCGAGATGCTTGGTCCTGTGGGCATTGAGGCTGTGCTGGACCAGCTGAAGATCAAGGCTATGAAGATGGGGTTTGAGTTCAACATCATGGTGGTGGGGCAAAGCGGGCTGGGCAAGTCCACGATGGTGAACACGCTGTTCAAGTCCAAAGTGTGGAAGTCAAACCCACCGGGCTTGGGGGTGCCCACACCCCAGACGCTGCAGCTGCATTCACTGACCCATGTCATAGAGGAGAAGGGTGTGAAGCTGAAGCTGACGGTGACGGACACGCCCGGCTTCGGGGACCAGATCAACAATGACAACTGCTGGGACCCCATCCTGGGCTACATCAACGAGCAATACGAGCAGTACCTGCAGGAGGAGATCCTCATCACCCGCCAGCGCCACATCCCAGACACCCGGGTGCACTGCTGCGTGTACTTTGTACCACCCACTGGGCACTGCCTGCGGCCCCTGGACATTGAGTTCCTGCAGCGGCTGTGCCGGACTGTGAATGTGGTGCCCGTGATTGCCAGGGCCGACAGCCTGACCATGGAGGAGCGAGAGGCCTTCAGGCGCAGGATCCAGCAGAACCTGAGGACCCACTGCATCGACGTCTACCCCCAGATGTGCTTTGACGAGGACATCAATGACAAAATCCTCAACAGCAAGTTACGGGACCGAATCCCTTTTGCCGTGGTAGGGGCTGACCAAGAGCACCTGGTGAACGGGAGGTGTGTCCTGGGCCGGAAGACCAAGTGGGGCATCATTGAAGTGGAGAACATGGCGCACTGTGAATTTCCTCTCCTGAGAGACCTGCTTATCCGCTCCCACCTCCAAGACCTGAAGGACATAACCCACAACATCCACTATGAGAACTACCGCGTCATCAGACTCAATGAAAGCCACCTGCTGCCCCGCGGGCCCGGCTGGGTGAACCTGGCCCCGGCCTCCCCAGGACAGCTGACCACCCCCCGGACCTTCAAGGTCTGCAGGGGGGCCCATGACGATTCTGATGATGAGTTCTGA
Amino sequence
MDPLRRSPSPCLSSQPSSPSTPPCEMLGPVGIEAVLDQLKIKAMKMGFEFNIMVVGQSGLGKSTMVNTLFKSKVWKSNPPGLGVPTPQTLQLHSLTHVIEEKGVKLKLTVTDTPGFGDQINNDNCWDPILGYINEQYEQYLQEEILITRQRHIPDTRVHCCVYFVPPTGHCLRPLDIEFLQRLCRTVNVVPVIARADSLTMEEREAFRRRIQQNLRTHCIDVYPQMCFDEDINDKILNSKLRDRIPFAVVGADQEHLVNGRCVLGRKTKWGIIEVENMAHCEFPLLRDLLIRSHLQDLKDITHNIHYENYRVIRLNESHLLPRGPGWVNLAPASPGQLTTPRTFKVCRGAHDDSDDEF*