ENST00000576985.6 ZSCAN10
Information
- Transcript ID
- ENST00000576985.6
- Genome
- hg19
- Position
- chr16:3,138,891-3,149,295
- Strand
- -
- CDS length
- 2,343
- Amino acid length
- 781
- Gene symbol
- ZSCAN10
- Gene type
- protein-coding
- Gene description
- zinc finger and SCAN domain containing 10
- Gene Entrez Gene ID
- 84891
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 3,138,891 | 3,140,647 |
| 5 | 3,141,541 | 3,141,598 |
| 4 | 3,141,765 | 3,141,829 |
| 3 | 3,142,050 | 3,142,317 |
| 2 | 3,142,543 | 3,143,005 |
| 1 | 3,149,191 | 3,149,295 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 3,139,092 | 3,140,647 |
| 5 | CDS | 3,141,541 | 3,141,598 |
| 4 | CDS | 3,141,765 | 3,141,829 |
| 3 | CDS | 3,142,050 | 3,142,317 |
| 2 | CDS | 3,142,543 | 3,142,938 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 3,088,890 | 3,099,294 | Link |
CDS sequence
ATGCTTGGAGAATCAGTCCCAGCTGCCGTGGAGCAGGAGCAGCTGGGGGAAGTCAAGCTGGAGGAGGAGGAGGCTGTCAGCCCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCCACGGGCGTCCCTGAGCCGGCTCCGGGAGCTCTGCGGCCACTGGCTGCGGCCGGCTCTGCACACCAAGAAACAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGAGTGTGCTGCCTCCGCACCTCCTGGGCCGCCTGCAGGGGCAGCCGCTCAGGGATGGGGAGGAGGTGGTGCTGCTGCTCGAGGGCATCCACCGGGAGCCCAGCCACGCGGGGCCGCTGGATTTTAGTTGTAATGCTGGCAAGAGTTGTCCCCGTGCAGACGTCACCTTGGAGGAAAAGGGGTGTGCTTCCCAGGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTGCGGAAGAGCCTTCAGTGCTGGGCCCATCGGATGAGCCTCCCCGACCCCAGCCAAGGGCTGCCCAGCCTGCTGAGCCGGGACAGTGGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGCCCGGGGCCCCAGAAGACATTCCAGGCCCTGCAAGAAAGCAGTCCCCAGGGCCCCTCACCATGGCCAGAGGAGAGTTCCCGAGATCAGGAGCTGGCGGCTGTGCTGGAGTGCCTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGCAGATAGTCCTGGGGTGCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGGCGCTGCGGCTAGCGGCCCTGGTGAAGATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCCGGCTGGGCGCTCCTTCCTGTGCCTTTGCTGCGGGAAGAGCTTCGGCCGCAGCTCCATTCTCAAGCTGCACATGCGCACTCACACGGACGAGCGGCCGCACGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAGCTCGCACCTGAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGCCAGGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACTCCGACCGGAGGCCCTTCGTGTGCAGCGACTGCGGCAAGGCCTTCCGGCGCAGCGAGCACCTGGTGGCCCACCGGAGGGTGCACACGGGCGAGCGGCCCTTCTCCTGCCAGGCTTGCGGCCGCAGCTTCACGCAGAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACACGGGCGAGAAGCCCTACGCCTGTCCGCAGTGCGGGAAGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCACCAGCGCAGCCACACGGGCGAGAAGCCCTGCCGCTGCAGCGAGTGCGGTGAGGGCTTCAGCCAGAGCGCCCACCTGGCGCGCCACCAGCGCATCCACACAGGGGAGAAGCCCCACGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATCGCCGCAGCCACACGGGCGAGCGGCCCTACAGCTGTCAGACGTGCGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCAGGAGCAGGCCGAGCCCCCGCAGGAGTGCGTGGAGTGCGGGAAGAGCTTCAGCCGCAGCTGCAATCTGCTGCGACACCTGCTGGTGCACACGGGCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCAGCTTCAGCCGCAACTCCCACCTGCTGCGCCACCTGCGCACCCACGCCCGCGAGACGCTGTACTAG
Amino sequence
MLGESVPAAVEQEQLGEVKLEEEEAVSPEDPRRPESRLRPEVAHQLFRCFQYQEDMGPRASLSRLRELCGHWLRPALHTKKQILELLVLEQFLSVLPPHLLGRLQGQPLRDGEEVVLLLEGIHREPSHAGPLDFSCNAGKSCPRADVTLEEKGCASQVPSHSPKKELPAEEPSVLGPSDEPPRPQPRAAQPAEPGQWRLPPSSKQPLSPGPQKTFQALQESSPQGPSPWPEESSRDQELAAVLECLTFEDVPENKAWPAHPLGFGSRTPDKEEFKQEEPKGAAWPTPILAESQADSPGVPGEPCAQSLGRGAAASGPGEDGSLLGSSEILEVKVAEGVPEPNPELQFICADCGVSFPQLSRLKAHQLRSHPAGRSFLCLCCGKSFGRSSILKLHMRTHTDERPHACHLCGHRFRQSSHLSKHLLTHSSEPAFLCAECGRGFQRRASLVQHLLAHAQDQKPPCAPESKAEAPPLTDVLCSHCGQSFQRRSSLKRHLRIHARDKDRRSSEGSGSRRRDSDRRPFVCSDCGKAFRRSEHLVAHRRVHTGERPFSCQACGRSFTQSSQLVSHQRVHTGEKPYACPQCGKRFVRRASLARHLLTHGGPRPHHCTQCGKSFGQTQDLARHQRSHTGEKPCRCSECGEGFSQSAHLARHQRIHTGEKPHACDTCGHRFRNSSNLARHRRSHTGERPYSCQTCGRSFRRNAHLRRHLATHAEPGQEQAEPPQECVECGKSFSRSCNLLRHLLVHTGARPYSCTQCGRSFSRNSHLLRHLRTHARETLY*