ENST00000715180.1 GREP1
Information
- Transcript ID
- ENST00000715180.1
- Genome
- hg19
- Position
- chr16:3,038,263-3,052,012
- Strand
- +
- CDS length
- 1,245
- Amino acid length
- 415
- Gene symbol
- GREP1
- Gene type
- protein-coding
- Gene description
- glycine rich extracellular protein 1
- Gene Entrez Gene ID
- 283875
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 3,038,263 | 3,038,341 |
| 2 | 3,038,591 | 3,038,623 |
| 3 | 3,039,524 | 3,039,553 |
| 4 | 3,039,975 | 3,040,007 |
| 5 | 3,040,088 | 3,040,123 |
| 6 | 3,040,553 | 3,040,588 |
| 7 | 3,041,049 | 3,041,102 |
| 8 | 3,041,379 | 3,041,438 |
| 9 | 3,042,404 | 3,042,439 |
| 10 | 3,042,806 | 3,042,835 |
| 11 | 3,042,932 | 3,042,964 |
| 12 | 3,044,699 | 3,044,728 |
| 13 | 3,044,807 | 3,044,839 |
| 14 | 3,044,928 | 3,044,963 |
| 15 | 3,045,285 | 3,045,317 |
| 16 | 3,045,620 | 3,045,655 |
| 17 | 3,045,740 | 3,045,772 |
| 18 | 3,046,497 | 3,046,532 |
| 19 | 3,046,674 | 3,046,706 |
| 20 | 3,047,054 | 3,047,086 |
| 21 | 3,047,804 | 3,047,836 |
| 22 | 3,048,357 | 3,048,389 |
| 23 | 3,048,495 | 3,048,524 |
| 24 | 3,048,849 | 3,048,980 |
| 25 | 3,049,903 | 3,049,944 |
| 26 | 3,050,087 | 3,050,119 |
| 27 | 3,050,715 | 3,050,828 |
| 28 | 3,051,282 | 3,051,335 |
| 29 | 3,051,562 | 3,052,012 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 3,038,278 | 3,038,341 |
| 2 | CDS | 3,038,591 | 3,038,623 |
| 3 | CDS | 3,039,524 | 3,039,553 |
| 4 | CDS | 3,039,975 | 3,040,007 |
| 5 | CDS | 3,040,088 | 3,040,123 |
| 6 | CDS | 3,040,553 | 3,040,588 |
| 7 | CDS | 3,041,049 | 3,041,102 |
| 8 | CDS | 3,041,379 | 3,041,438 |
| 9 | CDS | 3,042,404 | 3,042,439 |
| 10 | CDS | 3,042,806 | 3,042,835 |
| 11 | CDS | 3,042,932 | 3,042,964 |
| 12 | CDS | 3,044,699 | 3,044,728 |
| 13 | CDS | 3,044,807 | 3,044,839 |
| 14 | CDS | 3,044,928 | 3,044,963 |
| 15 | CDS | 3,045,285 | 3,045,317 |
| 16 | CDS | 3,045,620 | 3,045,655 |
| 17 | CDS | 3,045,740 | 3,045,772 |
| 18 | CDS | 3,046,497 | 3,046,532 |
| 19 | CDS | 3,046,674 | 3,046,706 |
| 20 | CDS | 3,047,054 | 3,047,086 |
| 21 | CDS | 3,047,804 | 3,047,836 |
| 22 | CDS | 3,048,357 | 3,048,389 |
| 23 | CDS | 3,048,495 | 3,048,524 |
| 24 | CDS | 3,048,849 | 3,048,980 |
| 25 | CDS | 3,049,903 | 3,049,944 |
| 26 | CDS | 3,050,087 | 3,050,119 |
| 27 | CDS | 3,050,715 | 3,050,828 |
| 28 | CDS | 3,051,282 | 3,051,335 |
| 29 | CDS | 3,051,562 | 3,051,587 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 2,988,262 | 3,002,011 | Link |
CDS sequence
ATGGGCGCCTGGGCCTTCCCCGCAGCCCTTTTCCTTCTCTGCCTGACTTCCGAGAGCCTGCAAGGGCTGCCCCTTCTGCCTCCTGGCCTGGGGAAAGTCTATGGCCCCCACAGTGGCCTGGGAGCAGGCTATGATGGGGGCGTGAAGCCACAGAAGCCAGGATTCGTGGTCAGGCATGGGCTGGGAACCCAGCCAGGGTTCAGGACCTTCGCAGGTGCTGCAGCCCAGCCAGGATATGGAAACGGGCTGGGAGCAGCGGCCTTCCCAGTGGCCGGAGCCCAGTCAGGATTGGGGAGCAGAAGTGGTTTGGGCGCTGGCACTCTTCCAGGGGCAGGAACCCCACCAGGATACAACAATGGAAACGGACCGGGAACCCAGCCAGGTCCTGCCGCTCAAAATGGCTTTGGACCAGGCTTTGGAGGGGGTGGAAAACCCCAGAAGCCAGGCCCCACCACTCAAAATGGCTATAGACCAGGCTATGTGGGGGCCGTCAAACCCCAGAAGCCAGGATTCCAGTACAGAATTGGGCTGGGAGCCCAGCCAGGCTTTAGAGGGGACATGAAGGCACAGGAGCCAGTCTTGACAGCCCAGAACCGATTTGGATTTGGAGCAGGCCTTGGAGGGAATGTGAAGCCTCTGAAGCCAGAATATGGCCATGGAAATGGACCGGGAGTCCAGCCAGGCCTAGGAGCGGGGATGAAGCCTCAGATGCCAGGCTATTTGGGGGTTATGAAGGCCCAGAAGCCAGGTGCTGGAGAGGGCATGAAACCTCAGAAGCCAGGCCTGCGAGGGACCTTGAAGCCTCAGAAGTCAGGACACGGCCATGAAAATGGGCCCTGGCCAGGTCCCTGCAATGCGAGGGTCGCTCCGATGCTCCTCCCCAGGCTTCCCACTCCAGGGGTCCCTTCGGACAAAGAGGGTGGCTGGGGCCTGAAATCCCAGCCCCCTTCCGCAGTGCAGAATGGCAAGTTACCAGGGCACCAGCCTCCAAATGGCTATGGACCGGGAGCAGAACCAGGTTTTAATGGTGGCCTCGAGCCACAGAAAATTGGGCAGGCCGGGGTGCTGTGGAACTCTCGCTGGCCCACCCTCCAGGCCTGGGGGGCCGGCTTGAAGCCTGGATATCAGGCTGGAGATGAATATGCTGAGGCCAGGAGCCAGCCAGGGGGCCCCGACGTGAAGAGAGGCAGCAATGGCCAGCTGGGGAATGGCTACGGAGGCCGCTGCCCTCTGGGGAAATGCTGA
Amino sequence
MGAWAFPAALFLLCLTSESLQGLPLLPPGLGKVYGPHSGLGAGYDGGVKPQKPGFVVRHGLGTQPGFRTFAGAAAQPGYGNGLGAAAFPVAGAQSGLGSRSGLGAGTLPGAGTPPGYNNGNGPGTQPGPAAQNGFGPGFGGGGKPQKPGPTTQNGYRPGYVGAVKPQKPGFQYRIGLGAQPGFRGDMKAQEPVLTAQNRFGFGAGLGGNVKPLKPEYGHGNGPGVQPGLGAGMKPQMPGYLGVMKAQKPGAGEGMKPQKPGLRGTLKPQKSGHGHENGPWPGPCNARVAPMLLPRLPTPGVPSDKEGGWGLKSQPPSAVQNGKLPGHQPPNGYGPGAEPGFNGGLEPQKIGQAGVLWNSRWPTLQAWGAGLKPGYQAGDEYAEARSQPGGPDVKRGSNGQLGNGYGGRCPLGKC*