ENST00000566339.6 SPSB3
Information
- Transcript ID
- ENST00000566339.6
- Genome
- hg19
- Position
- chr16:1,826,713-1,832,572
- Strand
- -
- CDS length
- 1,068
- Amino acid length
- 356
- Gene symbol
- SPSB3
- Gene type
- protein-coding
- Gene description
- splA/ryanodine receptor domain and SOCS box containing 3
- Gene Entrez Gene ID
- 90864
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 1,826,713 | 1,827,444 |
| 6 | 1,827,748 | 1,827,873 |
| 5 | 1,827,947 | 1,828,049 |
| 4 | 1,828,135 | 1,828,322 |
| 3 | 1,828,436 | 1,828,613 |
| 2 | 1,831,359 | 1,831,496 |
| 1 | 1,832,503 | 1,832,572 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 1,827,098 | 1,827,444 |
| 6 | CDS | 1,827,748 | 1,827,873 |
| 5 | CDS | 1,827,947 | 1,828,049 |
| 4 | CDS | 1,828,135 | 1,828,322 |
| 3 | CDS | 1,828,436 | 1,828,613 |
| 2 | CDS | 1,831,359 | 1,831,484 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 1,776,712 | 1,782,571 | Link |
CDS sequence
ATGGCCAGACGCCCCCGGAACAGCAGGGCCTGGCACTTCGTCCTGAGTGCAGCCCGCCGAGACGCAGATGCCCGGGCCGTGGCTCTAGCAGGCTCCACTAACTGGGGCTACGACTCTGATGGGCAGCACAGCGACTCGGACTCCGACCCCGAGTACTCCACGCTGCCGCCATCCATCCCCAGTGCGGTGCCCGTGACCGGCGAGTCCTTCTGTGACTGTGCTGGGCAGAGCGAGGCCTCCTTCTGTAGCAGCCTGCACTCGGCCCACCGGGGCAGGGACTGCCGCTGCGGAGAGGAAGACGAGTATTTCGACTGGGTCTGGGATGACTTAAATAAGTCATCAGCCACCCTGCTGAGCTGTGACAACCGTAAGGTCAGCTTCCACATGGAGTACAGCTGCGGCACAGCGGCCATCCGGGGCACCAAGGAGCTGGGGGAGGGCCAGCACTTCTGGGAGATCAAGATGACCTCTCCCGTCTACGGCACCGACATGATGGTGGGCATCGGGACGTCGGATGTGGACCTGGACAAATACCGCCACACGTTCTGCAGCCTGCTGGGCAGGGATGAGGACAGCTGGGGCCTCTCCTACACGGGCCTCCTCCACCACAAGGGCGACAAGACCAGCTTCTCATCGCGGTTCGGCCAGGGCTCCATCATTGGCGTGCACCTGGACACCTGGCACGGCACACTCACCTTTTTCAAGAACAGGAAGTGTATAGGTGTGGCAGCCACCAAGCTGCAGAACAAGAGATTCTACCCGATGGTGTGCTCCACGGCGGCCCGGAGCAGCATGAAGGTCACCCGCTCCTGTGCCAGCGCCACTTCCCTCCAGTACCTGTGCTGCCACCGCCTGCGCCAGCTGCGGCCAGACTCGGGAGACACGCTGGAGGGTCTGCCGCTGCCGCCGGGCCTCAAGCAGGTGCTACACAACAAGCTGGGCTGGGTCCTGAGCATGAGTTGCAGCCGCCGCAAGGCTCCAGTGTCCGATCCCCAGGCAGCGACCTCCGCCCACCCCAGCAGTCGCGAGCCTCGGCCCTGCCAGAGGAAGCGCTGCCGCCGGACCTGA
Amino sequence
MARRPRNSRAWHFVLSAARRDADARAVALAGSTNWGYDSDGQHSDSDSDPEYSTLPPSIPSAVPVTGESFCDCAGQSEASFCSSLHSAHRGRDCRCGEEDEYFDWVWDDLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATSLQYLCCHRLRQLRPDSGDTLEGLPLPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAATSAHPSSREPRPCQRKRCRRT*