ENST00000710415.1 SNRNP25
Information
- Transcript ID
- ENST00000710415.1
- Genome
- hg19
- Position
- chr16:103,828-107,669
- Strand
- +
- CDS length
- 483
- Amino acid length
- 161
- Gene symbol
- SNRNP25
- Gene type
- protein-coding
- Gene description
- small nuclear ribonucleoprotein U11/U12 subunit 25
- Gene Entrez Gene ID
- 79622
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 103,828 | 104,058 |
| 2 | 105,459 | 105,549 |
| 3 | 105,777 | 105,882 |
| 4 | 106,539 | 106,613 |
| 5 | 107,086 | 107,669 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 103,906 | 104,058 |
| 2 | CDS | 105,459 | 105,549 |
| 3 | CDS | 105,777 | 105,882 |
| 4 | CDS | 106,539 | 106,613 |
| 5 | CDS | 107,086 | 107,143 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 53,828 | 57,669 | Link |
CDS sequence
CTGGAGGAGACGGAGGCCGCGGGTGGGCCCGAGGCGCAAGAGGAAGATGAGGACGAAGAAGAGGCGCTGCCGCACTCCGAGGCCATGGACGTGTTCCAGGAGGGTCTGGCTATGGTGGTGCAGGACCCGCTGCTCTGCGATCTGCCGATCCAGGTTACTCTGGAAGAAGTCAACTCCCAAATAGCCCTAGAATACGGCCAGGCAATGACGGTCCGAGTGTGCAAGATGGATGGAGAAGTAATGCCCGTGGTTGTAGTGCAGAGTGCCACAGTCCTGGACCTGAAGAAGGCCATCCAGAGATACGTGCAGCTCAAGCAGGAGCGTGAAGGGGGCATTCAGCACATCAGCTGGTCCTACGTGTGGAGGACGTACCATCTGACCTCTGCAGGAGAGAAACTCACGGAAGACAGAAAGAAGCTCCGAGACTACGGCATCCGGAATCGAGACGAGGTTTCCTTCATCAAAAAGCTGAGGCAAAAGTGA
Amino sequence
LEETEAAGGPEAQEEDEDEEEALPHSEAMDVFQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK*