ENST00000594047.2 SYNM

Information
Transcript ID
ENST00000594047.2
Genome
hg19
Position
chr15:99,645,286-99,675,788
Strand
+
CDS length
3,761
Amino acid length
1,253.667
Gene symbol
SYNM
Gene type
protein-coding
Gene description
synemin
Gene Entrez Gene ID
23336
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 99,645,286 99,646,107
2 99,646,108 99,646,214
3 99,653,796 99,653,920
4 99,666,927 99,666,997
5 99,669,572 99,672,018
6 99,672,955 99,675,788
CDS
Exon number Type Start Stop
1 CDS 99,645,406 99,646,107
2 CDS 99,646,108 99,646,214
3 CDS 99,653,796 99,653,920
4 CDS 99,666,927 99,666,997
5 CDS 99,669,572 99,672,018
6 CDS 99,672,955 99,673,263
Other genome
Genome Chromosome Start End Links
hg38 chr15 99,105,080 99,135,583 Link
CDS sequence
ATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATGACTACGTGTGTCGGGTGCGGGAGCTGGAGCGCGAAAACCTACTCCTGGAGGAGGAGCTGCGCGGCCGGCGCGGGCGAGAGGGCCTGTGGGCCGAGGGGCAGGCCCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGGGCGAGCGGGACGCTCTGCGGCGCGAGCTGCGGGAGCTGCAGCGCCTGGATGCGGAGGAGCGCGCCGCCCGCGGCCGCCTGGACGCCGAGCTGGGTGCGCAGCAGCGCGAGCTGCAGGAGGCGCTGGGCGCGCGCGCCGCCCTCGAGGCGCTGCTGGGCCGGCTGCAGGCCGAGCGCCGAGGCCTCGACGCGGCCCACGAACGCGACGTGAGGGAGCTGCGCGCGCGCGCCGCCAGCCTTACCATGCATTTCCGCGCCCGCGCCACCGGCCCCGCCGCGCCGCCGCCACGCCTGCGGGAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAGTCGTGGCGGGAGACGGTGCAGCTGTACGAGGACGAGGTGCGCGAGCTGGAGGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGGAAGAGACGCGGCTGTGCGCGCAGGAGGCAAGGCGCTGCGGCGCGAGGCGCTCGGGTTGGAGCAGCTGCGCGCGCGGCTGGAGGACGCGCTGCTGCGGATGCGCGAGGAGTACGGGATACAGGCCGAGGAGCGGCAGAGAGTGATTGACTGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTGACTGGCTGCGGGACTATCAGGACCTCCTGCAGGTGAAGACCGGCCTCAGTCTGGAGGTGGCGACCTACCGGGCCTTATTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGGGCTGAGCACGTTGAAAACATGCCGTCAGAATTCAGAAACAAATCCTATCACTATACCGACTCACTACTACAGAGGGAAAATGAAAGGAATCTATTTTCAAGGCAGAAAGCACCTTTGGCAAGTTTCAATCACAGCTCGGCACTGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGAGGTGATGCCAGAAGAGGCTTCTTGGGCTCGGGATATTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAACTTTCTCTCCAACCTATGGCCTTTTAAGAAATACTGAGGCTCAAGTGAAAACATTCCCTGACAGACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGCACACGGTCAAATGAGAGGACCGTCATTCTGGGAAAGAAAACAGAAGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACCAGAAACCATCCGAACAAAGCCAGAAGAGAAAATGTTCGATTCTAAAGAGAAGGCTTCCGAGGAGAGAAACCTAAGATGGGAAGAATTGACAAAGTTAGATAAGGAAGCGAGACAGAGAGAAAGCCAGCAGATGAAGGAGAAGGCTAAGGAGAAGGACTCACCGAAGGAGAAGAGCGTGCGAGAGAGAGAGGTGCCGATTAGTCTAGAAGTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGATGCTGGTGGTGGGACCGGTAGAGAGGCAGAAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAGCAGAAAACATCGTTACCAGTATCCTGAAGCAGTTCACTCAGTCTCCAGAGACAGAAGCATCTGCTGATTCTTTTCCAGACACAAAAGTCACTTACGTGGACAGGAAAGAGCTTCCTGGGGAAAGGAAAACAAAGACTGAAATAGTTGTGGAGTCTAAACTGACTGAGGATGTTGATGTTTCCGATGAAGCTGGCCTGGACTACCTTTTAAGCAAGGATATTAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCTCGGCCTGAAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGAGGAGCCCGTGAGTTATGTCAGCGGGGAGAAGCCGGAGGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCGAAGATGTGTCGCCAGGCCCCTGGGGGTTGGTTAAGGAGGAGGAAGGTTATGGAGAAAGCGATGTCACATTCTCAGTTAATCAGCATCGAAGGACCAAGCAGCCTCAGGAGAACACGACTCACGTGGAAGAAGTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGTTATTTTGTGTCCACTCCAGATGAACACCCCGGGGGGCACGACAGAGATGACGGCTCGGTGTACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGTTGTGAAGCCCTTGGATGTCCCAGCGCCCTCTCTGGAGGGGGACCTGGGTTCCACTCACTGGAAAGAACAAGCTAGAAGCGGTGAATTTCATGCCGAACCCACAGTCATTGAAAAAGAAATTAAAATACCCCACGAATTCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGTCCGCCCTCACCAGAGAGGGGCAGGGTGGGCCGGGGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCCGATCGGTTAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGAGATGGAGAAGGCTGTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAGCGGAGGCCCCGGCTGCTGGCATTCGCTTTAGGCGTTGGGCCACCCGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAGCGCACTCCCCAGGGCCCAGTGTCGGCCACTGTGGAGGTCAGCAGCCCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGAGCGAATGTCATATGAAGGACCCACTGCAGAAGTGGTGGAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCCTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTCAGATGAAAAGAAAGTTGCCCTCCTCTATCTAGACAATGAGGAGGAGGAGAATGATGGGCATTGGTTTTAA
Amino sequence
MLSWRLQTGPEKAELQELNARLYDYVCRVRELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEARRCGARRSGWSSCARGWRTRCCGCARSTGYRPRSGRE*LTAWRMRRQPSPWPWLTGCGTIRTSCR*RPASVWRWRPTGPYWKEKVIQR**SGLSTLKTCRQNSETNPITIPTHYYRGKMKGIYFQGRKHLWQVSITARHCILTCQGTVDLRRAHLLEVMPEEASWARDILPRPLPSRKTHTEKPSAVKPTSELSLQPMAF*EILRLK*KHSLTDQKPEIQGRSPFT*VKIPQLPASRTGIAETRWQQVLRKAHGQMRGPSFWERKQK*KPRGSKKETDQKPSEQSQKRKCSILKRRLPRRET*DGKN*QS*IRKRDREKASR*RRRLRRRTHRRRRACERERCRLV*KYPRTEEQRCPRKVCRRL*RMLVVGPVERQKQESYGSGWAPVMPLVLCKAIP*QKP*QKTSLPVS*SSSLSLQRQKHLLILFQTQKSLTWTGKSFLGKGKQRLK*LWSLN*LRMLMFPMKLAWTTF*ARILRKWG*KASQPSR**ETSSTSA*KGGRGEQRSSTWRSWRSP*VMSAGRSRRSFPSHSKWRRSKMCRQAPGGWLRRRKVMEKAMSHSQLISIEGPSSLRRTRLTWKK*QRQVIQRASRVILCPLQMNTPGGTTEMTARCTGRSTSRRNPPSGTLGRMKSCRGLEGGHRRTVQWARRL*SPWMSQRPLWRGTWVPLTGKNKLEAVNFMPNPQSLKKKLKYPTNSTPP*RASPPRSPGSSWWRSSGSWRKPFPSA*GRSCPPSPERGRVGRGAFPWMSRRSRVLVAVP*PWLLKSTSHKLWMPIG*TWRS*AKMRPVRWRRLWSRWFGRA*AGNAAQRLAAQMRKVERRPRLLAFALGVGPPGSCTSLQARARLLVGPLTARDSALPRAQCRPLWRSAAPQALPSHRCWRM*ARLQGT*NSAPLKSGGLSECHMKDPLQKWWRWM*VT*RRSAAGHRKRELSVCLTVVPGETRTVGMTRQLV*ALRPLLGKETRPTENRARSRPCLIRRCSSREW*TKGR*FQMKRKLPSSI*TMRRRRMMGIGF