ENST00000558459.5 SKIC8

Information
Transcript ID
ENST00000558459.5
Genome
hg19
Position
chr15:78,575,598-78,591,933
Strand
-
CDS length
639
Amino acid length
213
Gene symbol
SKIC8
Gene type
protein-coding
Gene description
SKI8 subunit of superkiller complex
Gene Entrez Gene ID
80349
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 78,575,598 78,575,863
8 78,577,603 78,577,681
7 78,578,383 78,578,475
6 78,580,631 78,580,724
5 78,581,961 78,582,054
4 78,582,293 78,582,441
3 78,587,288 78,587,315
2 78,588,017 78,588,067
1 78,591,904 78,591,933
CDS
Exon number Type Start Stop
9 CDS 78,575,774 78,575,863
8 CDS 78,577,603 78,577,681
7 CDS 78,578,383 78,578,475
6 CDS 78,580,631 78,580,724
5 CDS 78,581,961 78,582,054
4 CDS 78,582,293 78,582,441
3 CDS 78,587,288 78,587,315
2 CDS 78,588,017 78,588,028
Other genome
Genome Chromosome Start End Links
hg38 chr15 78,283,256 78,299,591 Link
CDS sequence
ATGACCAACCAGTACGGTATTCTCTTCAAACAAGAGCAAGTGGATGCCTGGACTTTGGCCTTTTCTCCTGATTCCCAGTATCTGGCCACAGGAACTCATGTCGGGAAAGTGAACATTTTTGGTGTGGAAAGTGGGAAAAAGGAATATTCTTTGGACACGAGAGGAAAATTCATTCTTAGTATTGCATATAGTCCTGATGGGAAATACCTAGCCAGTGGAGCCATAGATGGAATCATCAATATTTTTGATATTGCAACTGGAAAACTTCTGCATACCCTGGAAGGCCATGCCATGCCCATTCGCTCCTTGACCTTTTCCCCGGACTCCCAGCTCCTTGTCACTGCTTCAGATGATGGCTACATCAAGATCTATGATGTACAACATGCCAATTTGGCTGGCACGCTGAGCGGCCATGCCTCCTGGGTGCTGAACGTTGCATTCTGTCCTGATGACACTCACTTTGTTTCCAGTTCGTCTGACAAAAGTGTAAAAGTTTGGGATGTTGGAACGAGGACTTGTGTTCACACCTTCTTTGATCACCAGGATCAGGTCTGGGGAGTAAAATACAATGGAAATGGTTCAAAAATTGTGTCTGTTGGAGATGACCAGGAAATTCACATCTATGATTGTCCAATTTAA
Amino sequence
MTNQYGILFKQEQVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI*