ENST00000561603.5 RPAP1

Information
Transcript ID
ENST00000561603.5
Genome
hg19
Position
chr15:41,809,374-41,836,455
Strand
-
CDS length
3,387
Amino acid length
1,129
Gene symbol
RPAP1
Gene type
protein-coding
Gene description
RNA polymerase II associated protein 1
Gene Entrez Gene ID
26015
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
24 41,809,374 41,809,889
23 41,809,996 41,810,055
22 41,810,204 41,810,380
21 41,813,936 41,814,078
20 41,814,296 41,814,448
19 41,814,963 41,815,158
18 41,815,443 41,815,552
17 41,815,969 41,816,170
16 41,816,294 41,816,452
15 41,817,189 41,817,346
14 41,819,096 41,819,266
13 41,819,365 41,819,499
12 41,819,621 41,819,803
11 41,820,058 41,820,225
10 41,820,433 41,820,534
9 41,821,668 41,821,766
8 41,822,062 41,822,177
7 41,823,221 41,823,400
6 41,826,912 41,827,133
5 41,827,710 41,827,830
4 41,828,327 41,828,416
3 41,828,699 41,828,847
2 41,829,143 41,829,399
1 41,836,417 41,836,455
CDS
Exon number Type Start Stop
24 CDS 41,809,778 41,809,889
23 CDS 41,809,996 41,810,055
22 CDS 41,810,204 41,810,380
21 CDS 41,813,936 41,814,078
20 CDS 41,814,296 41,814,448
19 CDS 41,814,963 41,815,158
18 CDS 41,815,443 41,815,552
17 CDS 41,815,969 41,816,170
16 CDS 41,816,294 41,816,452
15 CDS 41,817,189 41,817,346
14 CDS 41,819,096 41,819,266
13 CDS 41,819,365 41,819,499
12 CDS 41,819,621 41,819,803
11 CDS 41,820,058 41,820,225
10 CDS 41,820,433 41,820,534
9 CDS 41,821,668 41,821,766
8 CDS 41,822,062 41,822,177
7 CDS 41,823,221 41,823,400
6 CDS 41,826,912 41,827,133
5 CDS 41,827,710 41,827,830
4 CDS 41,828,327 41,828,416
3 CDS 41,828,699 41,828,847
2 CDS 41,829,143 41,829,323
Other genome
Genome Chromosome Start End Links
hg38 chr15 41,517,176 41,544,257 Link
CDS sequence
ATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAATCTCCCAGATTTGCCCCCAGCTTTGGTCCCTTCTCCTCCAAAGAGAGCCAGGCCCAGCCCTGGCCACTGCCTGCCTGAGGATGAGGACCCAGAAGAGAGGCTGAGGAGGCATGATCAGCACATCACTGCTGTCTTGACTAAGATTATTGAACGAGATACAAGTTCAGTGGCCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCCCTGCTGTGTTCCTTCGCTCGCGGGACACACAGGGGAAATCAGCAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGAGGGTGCCGTGACCTGTGAGACACCCACTCCTAGGAACCAGGGCTGCCAGCTTCCTGGGAGCAGCCACAGCTTTCAGGGACCCAATCTGGTCACAGGGAAGGGGCTCAGGGATCAAGAAGCTGAGCAGGAAGCCCAGACTATCCATGAAGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTTGGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAGCCCAGGAAGAGAGACAAGCTGGAGCCAGAAGCCCCAGCTCTGGCATTGCCCGTGACCCCTCAGAAAGAATGGCTGCACATGGACACTGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTTGCCCCCTGTCCGGCGGCAGCAGACACAGGAGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGCCCCTGACGTGGACCTGCCCACCCACCTGGGTCTGCACCACCATGGAGAGGAGGCAGAGAGAGCGGGGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGCCCAGGCTGGTGAGTTTGGGGACCGGCTAGCAGGCAGTGTCTTAAGCCTCCTTTTGGATGCTGGTTTCCTCTTCCTACTGCGCTTCTCCTTGGATGACAGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCTCTTCGGGCTCTGCTGGTGGCTCCTGGAGATGAGGAGCTCCTCGACAGCACCTTCTCTTGGTACCATGGAGCTTTGACGTTCCCTCTGATGCCCAGCCAGGAGGACAAGGAGGATGAGGACGAGGATGAAGAATGCCCAGCAGGAAAAGCAAAAAGGAAAAGCCCTGAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGACATGATGTCATCAAGGGGCTCCTGGCTACCAGCCTGCTGCCTCGGCTGCGCTACGTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTCCTTGACATCCTGGCTGTGCTCATCCGCCTGGCCCGGCATTCCCTGGAATCAGCCACAAGGGTCCTGGAGTGCCCTCGGCTGATAGAGACTATAGTTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTGTGGGGGCAGGGCCTACCCCTAGTCTATACAAAGTACCCTGTGCTACTGCCATGAAACTACTTCGTGTCCTGGCCTCAGCTGGGAGGAATATTGCTGCCCGGCTGTTGAGCAGCTTTGATCTCCGGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAGAGGAAGCTGAGATGCTGAGCACCGAGGCCCTCCGTCTGTGGGCTGTGGCTGCCTCCTATGGCCAGGGCGGTTACCTTTACAGGGAGCTCTACCCAGTGCTGATGCGGGCCTTGCAGGTGGTGCCGCGGGAGCTCAGCACCCACCCACCTCAACCCCTGTCCATGCAGCGGATAGCCTCACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAACCATCAGTGATTCTGCTGAGGCCAGCCTCTCGGCCACCCCTTCCTTAGTCACTTGGACACAGGTGTCTGGGCTCCAGCCTCTTGTTGAGCCGTGTCTAAGGCAGACCTTGAAGTTGCTGTCCAGACCTGAGATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGCCTGTTGTTCCTGGGAGCCTACTACCAGGCCTGGAGCCAGCAACCAAGCTCATGCCCGGAGGATTGGCTCCAGGACATGCAGCGCCTGTCAGAGGAGCTGCTGCTGCCACTGCTGAGTCAGCCCACACTGGGCAGCCTGTGGGATTCCCTTAGGCACTGCTCCCTTCTCTGCAACCCGCTGTCCTGTGTGCCAGCCCTTGAAGCTCCCCCCAGCCTCGTGTCACTGGGCTGCTCGGGAGGCTGCCCCCGTCTCAGTCTGGCTGGCTCAGCCTCACCCTTCCCATTCCTCACTGCCCTCCTCTCTCTTCTTAATACCCTGGCCCAGATCCACAAGGGGCTGTGTGGCCAGCTGGCTGCCATATTGGCTGCCCCGGGACTCCAGAATTACTTCCTCCAGTGTGTGGCTCCTGGGGCTGCCCCACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCCCTCTATCATGGTATGGCCTTGGCCCTGCTGAGCCGGCTGCTGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAGCTGTGTATTCCGGCTGGAGTTCCTCCCTTGCCTGTGTCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTCTACTTCCGGACCCTGGTTACTGGTGCGCTCCGCCCACGTTGGTGCCCCGTGCTCTATGCTGTGGCTGTGGCTCATGTCAATAGCTTCATCTTCTCTCAGGACCCACAGAGCTCAGATGAGGTCAAAGCTGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGTCAGCACTACCTCCAGAGACTGA
Amino sequence
MLSRPKPGESEVDLLHFQSQFLAAGAAPAVQLVKKGNRGGGDANSDRPPLQDHRDVVMLDNLPDLPPALVPSPPKRARPSPGHCLPEDEDPEERLRRHDQHITAVLTKIIERDTSSVAVNLPVPSGVAFPAVFLRSRDTQGKSATSGKRSIFAQEIAARRIAEAKGPSVGEVVPNVGPPEGAVTCETPTPRNQGCQLPGSSHSFQGPNLVTGKGLRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSHSHTQEQTGETASEEQRPGGPSANVTKEEPLMSAFASEPRKRDKLEPEAPALALPVTPQKEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLAGSVLSLLLDAGFLFLLRFSLDDRVDGVIATAIRALRALLVAPGDEELLDSTFSWYHGALTFPLMPSQEDKEDEDEDEECPAGKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRLARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAGRNIAARLLSSFDLRSRLCRIIAEAPQELALPPEEAEMLSTEALRLWAVAASYGQGGYLYRELYPVLMRALQVVPRELSTHPPQPLSMQRIASLLTLLTQLTLAAGSTPAETISDSAEASLSATPSLVTWTQVSGLQPLVEPCLRQTLKLLSRPEMWRAVGPVPVACLLFLGAYYQAWSQQPSSCPEDWLQDMQRLSEELLLPLLSQPTLGSLWDSLRHCSLLCNPLSCVPALEAPPSLVSLGCSGGCPRLSLAGSASPFPFLTALLSLLNTLAQIHKGLCGQLAAILAAPGLQNYFLQCVAPGAAPHLTPFSAWALRHEYHLQYLALALAQKAAALQPLPATHAALYHGMALALLSRLLPGSEYLTHELLLSCVFRLEFLPCLCPWSVTQCLLKTTWPSFSSTSGPWLLVRSAHVGAPCSMLWLWLMSIASSSLRTHRAQMRSKLPAGVCCRKHGCWQMRVSGSTSCTISFPIPRSQRALSSILSCPLCVSTTSRD*