ENST00000377930.1 PRR20B
Information
- Transcript ID
- ENST00000377930.1
- Genome
- hg19
- Position
- chr13:57,721,622-57,724,643
- Strand
- +
- CDS length
- 666
- Amino acid length
- 222
- Gene symbol
- PRR20B
- Gene type
- protein-coding
- Gene description
- proline rich 20B
- Gene Entrez Gene ID
- 729233
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 57,721,622 | 57,721,835 |
| 2 | 57,721,990 | 57,722,060 |
| 3 | 57,723,082 | 57,724,643 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 57,722,009 | 57,722,060 |
| 3 | CDS | 57,723,082 | 57,723,695 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr13 | 57,147,488 | 57,150,509 | Link |
CDS sequence
ATGGAGGAACCAAGGCCTTCGAAGCGACTTCGCTCCATGGCCCCTAATCAAGCCTCAGGTGGGCCTCCTCCAGAGCCAGGCTGCTGTGTTGCGGACCCTGAAGGCTCCGTGGAAGCAGATGGGCCCGCACAGCCAGCCCAACCCGCAAAACCCATCGCTTACGTGAAACCCTTCAGACGGCAGCCCCCAGCTCGCCCAGAGTCACCCCCTCCTGCAGAGAGAGGCCGGCGCCGGGGAGGAAGCCGGCGGCCAGGGCGAGGCCGTGGCAGAAGGGCTGGGCCCCGCGGGGACGCTGGCCAGAGACAGGGGGCAGAAGGCTTGATGGCACCGGACGTGCACATCCAACTGGACCACCATGGAGAGCCAGGCCACCAGGGGGAACCGGAAATCACGGAGACCGCAGCCTTCTCCCTTTCTGAAACAGGTCCTCCGCCTGGAACTGTGCAGGAAGGCCCTGGCCCCGACGTGGCGCAACCTGAGCTGGGGTTTCAGGAGCCGCCCGCTGCTCCTGGGCCTCAGGCTGTTGACTGGCAACCCGTCTTGACCCTCTATCCCTGCATCGGGTTTAGGGCTCTGGGTGACTCAGCGGTTTTACAAGTCATTCAAACCCCCCAGGGCACCTACGTGCAAGGGGTCCCAGTGTTCCTCACCGACATTGCGTATTGA
Amino sequence
MEEPRPSKRLRSMAPNQASGGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGRRRGGSRRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHIQLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEGPGPDVAQPELGFQEPPAAPGPQAVDWQPVLTLYPCIGFRALGDSAVLQVIQTPQGTYVQGVPVFLTDIAY*