ENST00000530705.6 TPT1

Information
Transcript ID
ENST00000530705.6
Genome
hg19
Position
chr13:45,907,606-45,915,318
Strand
-
CDS length
519
Amino acid length
173
Gene symbol
TPT1
Gene type
protein-coding
Gene description
tumor protein, translationally-controlled 1
Gene Entrez Gene ID
7178
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 45,907,606 45,911,523
5 45,912,795 45,912,911
4 45,913,632 45,913,737
3 45,914,129 45,914,319
2 45,914,847 45,914,920
1 45,915,177 45,915,318
CDS
Exon number Type Start Stop
6 CDS 45,911,521 45,911,523
5 CDS 45,912,795 45,912,911
4 CDS 45,913,632 45,913,737
3 CDS 45,914,129 45,914,319
2 CDS 45,914,847 45,914,920
1 CDS 45,915,177 45,915,204
Other genome
Genome Chromosome Start End Links
hg38 chr13 45,333,471 45,341,183 Link
CDS sequence
ATGATTATCTACCGGGACCTCATCAGCCACGATGAGATGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGTTGTGCCTGGAGGTGGAGGGGAAGATGGTCAGTAGGACAGAAGGTAACATTGATGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGCCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACAAGTTTCACAAAAGAAGCCTACAAGAAGTACATCAAAGATTACATGAAATCAATCAAAGGGAAACTTGAAGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAAACTACCAGTTCTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTATTGGACTACCGTGAGGATGGTGTGACCCCATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAA
Amino sequence
MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC*