ENST00000376608.9 LRCOL1
Information
- Transcript ID
- ENST00000376608.9
- Genome
- hg19
- Position
- chr12:133,179,737-133,187,168
- Strand
- -
- CDS length
- 480
- Amino acid length
- 160
- Gene symbol
- LRCOL1
- Gene type
- protein-coding
- Gene description
- leucine rich colipase like 1
- Gene Entrez Gene ID
- 100507055
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 133,179,737 | 133,179,990 |
| 5 | 133,180,840 | 133,180,962 |
| 4 | 133,181,048 | 133,181,170 |
| 3 | 133,181,292 | 133,181,417 |
| 2 | 133,182,733 | 133,182,850 |
| 1 | 133,186,909 | 133,187,168 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 133,179,988 | 133,179,990 |
| 5 | CDS | 133,180,840 | 133,180,962 |
| 4 | CDS | 133,181,048 | 133,181,170 |
| 3 | CDS | 133,181,292 | 133,181,417 |
| 2 | CDS | 133,182,733 | 133,182,837 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 132,603,151 | 132,610,582 | Link |
CDS sequence
ATGGCCGGCCCGGGGTGGACGCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGGGGTCCATGGCAGGGTATGGGCCACAGAAGAAGTTGAACCTGTCCCATAAGGGCATCGGGGAGCCATGCAGGAGACACGAGGAGTGCCAGAGCAACTGCTGTACCATCAACAGCCTGGCCCCACACACGCTCTGCACCCCTAAGACCATCTTCCTGCAGTGCCTGCCCTGGAGGAAGCCCAATGGGTACAGATGCTCGCACGACTCAGAGTGCCAGAGCAGCTGCTGCGTCCGCAACAACAGCCCGCAGGAGTTGTGCACGCCCCAAAGCGTCTTCCTGCAGTGTGTGCCCTGGCGCAAGCCCAACGGCGACTTCTGCAGCAGCCATCAGGAGTGTCACAGCCAGTGCTGCATCCAGCTGAGGGAGTACAGCCCCTTCCGCTGCATTCCCCGGACCGGGATCCTGGCCCAGTGCCTGCCCCTGTGA
Amino sequence
MAGPGWTLLLLLLLLLLLGSMAGYGPQKKLNLSHKGIGEPCRRHEECQSNCCTINSLAPHTLCTPKTIFLQCLPWRKPNGYRCSHDSECQSSCCVRNNSPQELCTPQSVFLQCVPWRKPNGDFCSSHQECHSQCCIQLREYSPFRCIPRTGILAQCLPL*