ENST00000549621.5 RITA1

Information
Transcript ID
ENST00000549621.5
Genome
hg19
Position
chr12:113,623,331-113,630,169
Strand
+
CDS length
810
Amino acid length
270
Gene symbol
RITA1
Gene type
protein-coding
Gene description
RBPJ interacting and tubulin associated 1
Gene Entrez Gene ID
84934
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 113,623,331 113,623,826
2 113,623,998 113,624,121
3 113,624,488 113,624,853
4 113,629,115 113,630,169
CDS
Exon number Type Start Stop
3 CDS 113,624,552 113,624,853
4 CDS 113,629,115 113,629,622
Other genome
Genome Chromosome Start End Links
hg38 chr12 113,185,526 113,192,364 Link
CDS sequence
ATGAAGACCCCCGTGGAGCTGGCCGTCAGTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGGACGTCATATGTGGATGAGACTCTGTTTGGCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCTAACAGAACCAGAGGCGTGGGCAAGGAGGCATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCCACCCTCACACCAAGGAAGAAGAACAAATACAGACCCATCAGCCACACCCCGTCTTACTGTGATGAGTCGCTGTTTGGCTCCCGATCTGAAGGCGCCAGCTTCGGGGCCCCGCGGATGGCGAAGGGGGATGCCGCAAAGCTCCGTGCTCTCTTGTGGACGCCACCACCTACCCCCAGGGGTAGCCACTCGCCCCGCCCCAGGGAGGCACCACTGCGAGCCATTCACCCAGCTGGTCCCTCCAAGACAGAGCCGGGGCCAGCGGCAGACTCCCAGAAGTTATCTATGGGTGGGTTACACTCTTCACGCCCCCTGAAGCGGGGACTTTCCCATTCCCTCACCCACCTGAATGTCCCCAGCACTGGTCATCCAGCCACCAGTGCCCCCCACACAAATGGGCCTCAGGATCTCAGGCCTTCCACGTCAGGGGTGACCTTCCGGAGCCCCCTGGTGACTTCCAGGGCTCGCTCAGTTAGCATTTCAGTGCCATCTACCCCACGACGAGGTGGGGCCACCCAGAAACCAAAGCCCCCTTGGAAATGA
Amino sequence
MKTPVELAVSGMQTLGLQHRCRGGYRVKARTSYVDETLFGSPAGTRPTPPDFDPPWVEKANRTRGVGKEASKALGAKGSCETTPSRGSTPTLTPRKKNKYRPISHTPSYCDESLFGSRSEGASFGAPRMAKGDAAKLRALLWTPPPTPRGSHSPRPREAPLRAIHPAGPSKTEPGPAADSQKLSMGGLHSSRPLKRGLSHSLTHLNVPSTGHPATSAPHTNGPQDLRPSTSGVTFRSPLVTSRARSVSISVPSTPRRGGATQKPKPPWK*