ENST00000229330.9 HCFC2

Information
Transcript ID
ENST00000229330.9
Genome
hg19
Position
chr12:104,458,309-104,500,302
Strand
+
CDS length
2,379
Amino acid length
793
Gene symbol
HCFC2
Gene type
protein-coding
Gene description
host cell factor C2
Gene Entrez Gene ID
29915
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 104,458,309 104,458,501
2 104,459,945 104,460,093
3 104,461,725 104,461,885
4 104,473,223 104,473,431
5 104,474,524 104,474,608
6 104,476,278 104,476,384
7 104,476,491 104,476,679
8 104,480,625 104,480,792
9 104,481,764 104,481,816
10 104,487,164 104,487,341
11 104,489,138 104,489,341
12 104,490,138 104,490,211
13 104,492,121 104,492,258
14 104,495,746 104,495,931
15 104,496,737 104,500,302
CDS
Exon number Type Start Stop
1 CDS 104,458,339 104,458,501
2 CDS 104,459,945 104,460,093
3 CDS 104,461,725 104,461,885
4 CDS 104,473,223 104,473,431
5 CDS 104,474,524 104,474,608
6 CDS 104,476,278 104,476,384
7 CDS 104,476,491 104,476,679
8 CDS 104,480,625 104,480,792
9 CDS 104,481,764 104,481,816
10 CDS 104,487,164 104,487,341
11 CDS 104,489,138 104,489,341
12 CDS 104,490,138 104,490,211
13 CDS 104,492,121 104,492,258
14 CDS 104,495,746 104,495,931
15 CDS 104,496,737 104,497,051
Other genome
Genome Chromosome Start End Links
hg38 chr12 104,064,531 104,106,524 Link
CDS sequence
ATGGCGGCTCCCAGCCTCCTCAACTGGAGGCGAGTTTCTTCCTTCACGGGGCCGGTCCCCCGCGCCCGGCACGGACACCGAGCGGTGGCCATCCGGGAGCTGATGATCATCTTTGGAGGGGGAAATGAGGGCATCGCGGATGAGCTGCACGTCTACAACACGGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGA
Amino sequence
MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQGNNKKAPLN*