ENST00000416321.5 DEPDC4
Information
- Transcript ID
- ENST00000416321.5
- Genome
- hg19
- Position
- chr12:100,646,041-100,660,857
- Strand
- -
- CDS length
- 885
- Amino acid length
- 295
- Gene symbol
- DEPDC4
- Gene type
- protein-coding
- Gene description
- DEP domain containing 4
- Gene Entrez Gene ID
- 120863
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 100,646,041 | 100,646,314 |
| 4 | 100,649,827 | 100,650,004 |
| 3 | 100,656,042 | 100,656,187 |
| 2 | 100,657,275 | 100,657,671 |
| 1 | 100,660,698 | 100,660,857 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 100,646,308 | 100,646,314 |
| 4 | CDS | 100,649,827 | 100,650,004 |
| 3 | CDS | 100,656,042 | 100,656,187 |
| 2 | CDS | 100,657,275 | 100,657,671 |
| 1 | CDS | 100,660,698 | 100,660,854 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 100,252,263 | 100,267,079 | Link |
CDS sequence
ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATGGCGGTTCTTTTGACTCCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGACAGGATGCTCTGGTCCTTTTCAAGCTACTCAGCTATGGGATGGTATTATTCACTCTCTTCAGGCCCAAGTGGAAATAAAAAGAAGGAGGCATCATTTACAGACATACAAAGACTGTTTCACTGGTTCTGATGCTGTCGATGTGGTCTTAAGTCATCTTATGCAAAACACGTGCCTAAGTAGCAATGACATCTCTTGTCTTAAAGGGGTTCATCTTTGCCAAGTTCTAATGAATCACAAAGTATTTGAACCAGTAGGAATGAAGAAGCTTTTCAAAAAAGAAAAGGAATTAGAATTTGAAGATTCCAACATTAGTCTCTACAGGTTTCTAGGCAATAAATCATCTTACGATTGTTGCAAAAGACAAAAGGATGCTGAGAATGAGTTCAATGAAACCTTGAGACCAGGATATGAAATGATTTCAAATCCTCTAGCACAGGAGATTGGTGAGGAAAGAATTGAGGAACTTATTCATACAATAAATGGGAATCCAGCTTTATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGGAAAGAACAAACATTATTATGTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAAACACAAAATCTTCAACTAAACAAAGAGGAAGATCTTGTTATCACTAACACTTGCCTAGACAGAGAACTTATTCCAAGCTTATGTCTACCTGAAAAATGA
Amino sequence
MVPGEEPARELMAVLLTPRFRRLVSQNELPGPGLNGPSSRNRRDGFCRKRRTGCSGPFQATQLWDGIIHSLQAQVEIKRRRHHLQTYKDCFTGSDAVDVVLSHLMQNTCLSSNDISCLKGVHLCQVLMNHKVFEPVGMKKLFKKEKELEFEDSNISLYRFLGNKSSYDCCKRQKDAENEFNETLRPGYEMISNPLAQEIGEERIEELIHTINGNPALCPNITVQKPFLRLSKEDVWKEQTLLCLLQLIHLPFLDNILEPPVKTQNLQLNKEEDLVITNTCLDRELIPSLCLPEK*