ENST00000316824.4 ALX1
Information
- Transcript ID
- ENST00000316824.4
- Genome
- hg19
- Position
- chr12:85,673,998-85,695,562
- Strand
- +
- CDS length
- 981
- Amino acid length
- 327
- Gene symbol
- ALX1
- Gene type
- protein-coding
- Gene description
- ALX homeobox 1
- Gene Entrez Gene ID
- 8092
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 85,673,998 | 85,674,265 |
| 2 | 85,677,350 | 85,677,654 |
| 3 | 85,680,631 | 85,680,759 |
| 4 | 85,694,933 | 85,695,562 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 85,674,040 | 85,674,265 |
| 2 | CDS | 85,677,350 | 85,677,654 |
| 3 | CDS | 85,680,631 | 85,680,759 |
| 4 | CDS | 85,694,933 | 85,695,253 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 85,280,220 | 85,301,784 | Link |
CDS sequence
ATGGAGTTTCTGAGCGAGAAGTTTGCCCTCAAGAGCCCTCCGAGTAAAAACAGTGACTTTTACATGGGCGCAGGAGGTCCTCTGGAGCACGTTATGGAGACGCTGGACAATGAGTCCTTTTACAGCAAAGCGTCTGCAGGCAAATGCGTGCAGGCCTTCGGACCCCTGCCCCGCGCCGAGCATCACGTGCGCTTGGAGAGGACCTCGCCCTGTCAGGACAGCAGCGTGAACTATGGGATCACTAAAGTAGAAGGACAGCCCCTTCACACCGAACTGAATAGAGCTATGGACAACTGTAACAGTCTCCGAATGTCTCCCGTGAAAGGGATGCAAGAGAAGGGAGAGCTGGATGAACTTGGGGATAAATGTGATAGCAATGTATCCAGCAGTAAGAAACGGAGGCACCGAACCACCTTCACCAGTTTGCAGCTAGAGGAGCTGGAGAAAGTCTTTCAGAAAACTCATTACCCGGATGTGTATGTCAGAGAACAGCTTGCTCTGAGGACAGAGCTCACTGAGGCCAGGGTCCAGGTTTGGTTTCAAAATCGAAGGGCCAAATGGAGAAAAAGGGAACGTTATGGCCAAATACAACAAGCGAAAAGCCATTTTGCTGCCACCTATGATATATCAGTTTTGCCAAGGACTGACAGCTACCCACAGATTCAGAACAATTTGTGGGCAGGAAATGCAAGTGGTGGTTCTGTGGTTACTTCATGCATGTTACCACGTGACACTTCCTCCTGTATGACACCTTATTCTCACTCGCCTCGGACAGATTCCAGTTACACGGGGTTTTCAAACCACCAGAACCAGTTCAGCCACGTGCCCCTCAACAATTTTTTCACTGACTCTCTTCTTACTGGGGCAACCAATGGACATGCATTTGAAACAAAGCCAGAGTTTGAAAGGAGGTCTTCCAGTATCGCAGTTCTTCGAATGAAAGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTAA
Amino sequence
MEFLSEKFALKSPPSKNSDFYMGAGGPLEHVMETLDNESFYSKASAGKCVQAFGPLPRAEHHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWAM*