ENST00000551516.1 CPSF6

Information
Transcript ID
ENST00000551516.1
Genome
hg19
Position
chr12:69,633,422-69,663,353
Strand
+
CDS length
171
Amino acid length
57
Gene symbol
CPSF6
Gene type
protein-coding
Gene description
cleavage and polyadenylation specific factor 6
Gene Entrez Gene ID
11052
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 69,633,422 69,633,486
2 69,644,909 69,644,921
3 69,656,249 69,656,342
4 69,663,292 69,663,353
CDS
Exon number Type Start Stop
1 CDS 69,633,427 69,633,486
2 CDS 69,644,909 69,644,921
3 CDS 69,656,249 69,656,342
4 CDS 69,663,292 69,663,295
Other genome
Genome Chromosome Start End Links
hg38 chr12 69,239,642 69,269,573 Link
CDS sequence
ATGGCGGACGGCGTGGACCACATAGACATTTACGCGGATGTCGGCGAAGAGTTCAACCAGGAAGCTGAATATGAGAGAGAAGCAGAGAACGAGAGAGGCACCGGGATCGTGACCGAGACCGTGACCGAGAGCGTGACCGAGAGCGCGAATATCGTCATCGTTAGAAGCTGA
Amino sequence
MADGVDHIDIYADVGEEFNQEAEYEREAENERGTGIVTETVTESVTESANIVIVRS*