ENST00000619998.1 GGTLC3
Information
- Transcript ID
- ENST00000619998.1
- Genome
- hg38
- Position
- chr22:18,516,344-18,518,161
- Strand
- -
- CDS length
- 678
- Amino acid length
- 226
- Gene symbol
- GGTLC3
- Gene type
- protein-coding
- Gene description
- gamma-glutamyltransferase light chain family member 3
- Gene Entrez Gene ID
- 728226
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 18,516,344 | 18,516,647 |
| 5 | 18,516,952 | 18,517,065 |
| 4 | 18,517,147 | 18,517,259 |
| 3 | 18,517,362 | 18,517,489 |
| 2 | 18,517,722 | 18,517,931 |
| 1 | 18,518,063 | 18,518,161 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 18,516,501 | 18,516,647 |
| 5 | CDS | 18,516,952 | 18,517,065 |
| 4 | CDS | 18,517,147 | 18,517,259 |
| 3 | CDS | 18,517,362 | 18,517,489 |
| 2 | CDS | 18,517,722 | 18,517,897 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr22 | 20,366,211 | 20,368,028 | Link |
CDS sequence
ATGACCTCTGAGTTCTTCGCTGCCCAGCTCCGGTCCCAGATCTCTGACCACACCACTCACCCGATCTCCTACTACAAGCCCGAGTTCTACACGCCGGATGACGGGGGCACTGCTCACCTGTCTGTCGTCGCAGAGGACGGCAGTGCTGTGTCCGCCACCAGCACCATCAACCTCTACTTTGGCTCCAAGGTCTGCTCCCCGGTCAGTGGGATCCTGTTCAATAATGAATGGACGACTTCAGCTCTCCCAGCATTCACCAATGAGTTTGGGGCACCCCCCTCACCTGCCAATTTCATCCAGCCAGGGAAGCAGCCGCTCTTGTCCATGTGCCCGACGATCATGGTGGGCCAGGACGGCCAGGTCCGGATGGTGGTGGGAGCTGCTGGGGGCACGCAGATCACCACAGACACTGCACTGGCCATCATCTACAACCTCTGGTTCGGCTATGACGTGAAGAGGGCCGTGGAGGAGCCCCGGCTGCACAACAAGCTTCTGCCCAACGTCACGACAGTGGAGAGAAACATTGACCAGGCAGTGACTGCAGCCCTGGAGACCCGGCACCATCACACCCAGATCGCATCCACCTTCATCGCTGTGGTGCAAGCCATCGTCCGCACGGCTGGTGGCTGGGCAGCTGCCTCGGACTCCAGGAAAGGCGGGGAACCTGCTGGCTACTGA
Amino sequence
MTSEFFAAQLRSQISDHTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATSTINLYFGSKVCSPVSGILFNNEWTTSALPAFTNEFGAPPSPANFIQPGKQPLLSMCPTIMVGQDGQVRMVVGAAGGTQITTDTALAIIYNLWFGYDVKRAVEEPRLHNKLLPNVTTVERNIDQAVTAALETRHHHTQIASTFIAVVQAIVRTAGGWAAASDSRKGGEPAGY*