ENST00000551779.5 COPZ1

Information
Transcript ID
ENST00000551779.5
Genome
hg19
Position
chr12:54,718,935-54,744,405
Strand
+
CDS length
492
Amino acid length
164
Gene symbol
COPZ1
Gene type
protein-coding
Gene description
COPI coat complex subunit zeta 1
Gene Entrez Gene ID
22818
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,718,935 54,718,965
2 54,734,331 54,734,399
3 54,735,990 54,736,071
4 54,737,009 54,737,100
5 54,739,244 54,739,299
6 54,741,551 54,741,628
7 54,741,784 54,741,835
8 54,743,404 54,744,405
CDS
Exon number Type Start Stop
1 CDS 54,718,948 54,718,965
2 CDS 54,734,331 54,734,399
3 CDS 54,735,990 54,736,071
4 CDS 54,737,009 54,737,100
5 CDS 54,739,244 54,739,299
6 CDS 54,741,551 54,741,628
7 CDS 54,741,784 54,741,835
8 CDS 54,743,404 54,743,448
Other genome
Genome Chromosome Start End Links
hg38 chr12 54,325,151 54,350,621 Link
CDS sequence
ATGGAGGCGCTGATTTTGGAACCTTCCCTGTATACTGTCAAAGCCATCCTGATTCTGGACAATGATGGAGATCGACTTTTTGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATCGGACTGACAGTGAAATTGCCCTCTTGGAAGGCCTGACAGTGGTATACAAAAGCAGTATAGATCTCTATTTCTATGTGATTGGCAGCTCCTATGAAAATGAGCTGATGCTTATGGCTGTTCTGAACTGTCTCTTCGACTCATTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCACTGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTGTCTCAGGTATGA
Amino sequence
MEALILEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQV*