ENST00000552049.5 TAMALIN

Information
Transcript ID
ENST00000552049.5
Genome
hg19
Position
chr12:52,404,305-52,409,671
Strand
+
CDS length
759
Amino acid length
253
Gene symbol
TAMALIN
Gene type
protein-coding
Gene description
trafficking regulator and scaffold protein tamalin
Gene Entrez Gene ID
160622
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 52,404,305 52,404,346
2 52,404,665 52,404,719
3 52,404,823 52,404,991
4 52,407,471 52,407,564
5 52,407,661 52,407,727
6 52,407,919 52,407,985
7 52,408,478 52,409,671
CDS
Exon number Type Start Stop
3 CDS 52,404,967 52,404,991
4 CDS 52,407,471 52,407,564
5 CDS 52,407,661 52,407,727
6 CDS 52,407,919 52,407,985
7 CDS 52,408,478 52,408,983
Other genome
Genome Chromosome Start End Links
hg38 chr12 52,010,521 52,015,887 Link
CDS sequence
ATGACCTTACTCCCAAGCAAAGGGGGGGACACCATCGCCAGCGTCAATGGCCTGAATGTGGAAGGCATCCGGCATCGAGAGATTGTGGACATCATTAAGGCGTCAGGCAATGTTCTCAGACTGGAAACTCTATATGGGACATCAATTCGGAAGGCAGAACTGGAGGCTCGTCTGCAGTACCTGAAGCAAACCCTGTATGAGAAGTGGGGAGAGTACAGGTCCCTAATGGTGCAGGAGCAGCGGCTGGTGCATGGCCTGGTGGTGAAGGACCCCAGCATCTACGACACGCTGGAGTCGGTGCGCTCCTGCCTCTACGGCGCGGGCCTGCTCCCGGGCTCGCTGCCCTTCGGGCCTCTGCTCGCCGTGCCCGGGCGTCCCCGCGGAGGCGCCCGACGGGCCAGGGGCGACGCCGACGACGCCGTCTACCACACGTGCTTCTTCGGGGACTCCGAGCCGCCGGCGCTGCCGCCCCCGCCGCCCCCGGCCCGCGCCTTCGGCCCGGGCCCCGCCGAGACCCCTGCCGTGGGGCCGGGCCCTGGGCCGCGGGCCGCGCTGAGCCGCAGCGCCAGTGTGCGGTGCGCGGGCCCTGGCGGGGGCGGAGGCGGGGGCGCGCCGGGCGCGCTCTGGACTGAGGCTCGCGAGCAGGCCCTATGCGGCCCCGGCCTGCGCAAAACCAAGTACCGCAGCTTCCGCCGGCGGCTGCTCAAGTTCATCCCCGGACTCAACCGCTCCCTGGAGGAGGAGGAGAGCCAGCTGTAG
Amino sequence
MTLLPSKGGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYGTSIRKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRPRGGARRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSASVRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEESQL*