ENST00000552739.5 LETMD1
Information
- Transcript ID
- ENST00000552739.5
- Genome
- hg19
- Position
- chr12:51,442,129-51,454,184
- Strand
- +
- CDS length
- 732
- Amino acid length
- 244
- Gene symbol
- LETMD1
- Gene type
- protein-coding
- Gene description
- LETM1 domain containing 1
- Gene Entrez Gene ID
- 25875
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 51,442,129 | 51,442,261 |
| 2 | 51,449,618 | 51,449,804 |
| 3 | 51,449,927 | 51,450,028 |
| 4 | 51,450,133 | 51,450,285 |
| 5 | 51,451,815 | 51,451,911 |
| 6 | 51,453,144 | 51,454,184 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 51,442,140 | 51,442,261 |
| 2 | CDS | 51,449,618 | 51,449,804 |
| 3 | CDS | 51,449,927 | 51,450,028 |
| 4 | CDS | 51,450,133 | 51,450,285 |
| 5 | CDS | 51,451,815 | 51,451,911 |
| 6 | CDS | 51,453,144 | 51,453,214 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 51,048,346 | 51,060,401 | Link |
CDS sequence
ATGGCGCTCTCCAGGGTGTGCTGGGCTCGGTCGGCTGTGTGGGGCTCGGCAGTCACCCCTGGACATTTTGTCACCCGGAGGCTGCAACTTGGTCGCTCTGGCCTGGCTTGGGGGGCCCCTCGGTACCTGTTTCCCAGGCAACTACTGATCAGGCATTTCTGGACCCCAAAACAACAAACTGATTTCTTAGATATCTATCATGCTTTCCGGAAGCAGTCCCACCCAGAAATTATTAGTTATTTAGAAAAGGTCATCCCTCTCATTTCTGATGCAGGACTCCGGTGGCGTCTGACAGATCTGTGCACCAAGATACAGCGTGGTACCCACCCAGCAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTAACCATCCTCTGGGCATGAACCAACTCCAGGCTTTGCACGTGAAAGCCTTGAGCCGGGCCATGCTTCTCACATCTTACCTGCCTCCTCCCTTGTTGAGACATCGTTTGAAGACTCATACAACTGTGATTCACCAACTGGACAAGGCTTTGGCAAAGCTGGGGATTGGCCAGCTGACTGCTCAGGAAGTAAAATCGGCTTGTTATCTCCGTGGCCTGAATTCTACGCATATTGGTGAAGATAGGTGTCGAACTTGGCTGGGAGAATGGCTGCAGATTTCCTGCAGCCTGAAAGAAGCTGAGCTGTCTCTCTTGCTGCACAACGTGGTCCTGCTCTCCACCAACTACCTTGGGACAAGGCGCTGA
Amino sequence
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISCSLKEAELSLLLHNVVLLSTNYLGTRR*