ENST00000518444.5 LARP4

Information
Transcript ID
ENST00000518444.5
Genome
hg19
Position
chr12:50,794,712-50,870,246
Strand
+
CDS length
2,172
Amino acid length
724
Gene symbol
LARP4
Gene type
protein-coding
Gene description
La ribonucleoprotein 4
Gene Entrez Gene ID
113251
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 50,794,712 50,794,811
2 50,821,548 50,821,692
3 50,822,718 50,822,873
4 50,824,278 50,824,353
5 50,829,271 50,829,407
6 50,831,518 50,831,621
7 50,834,222 50,834,332
8 50,835,373 50,835,426
9 50,847,243 50,847,455
10 50,848,097 50,848,200
11 50,854,918 50,855,130
12 50,856,365 50,856,413
13 50,860,742 50,860,903
14 50,867,198 50,867,319
15 50,867,782 50,867,950
16 50,869,309 50,870,246
CDS
Exon number Type Start Stop
1 CDS 50,794,794 50,794,811
2 CDS 50,821,548 50,821,692
3 CDS 50,822,718 50,822,873
4 CDS 50,824,278 50,824,353
5 CDS 50,829,271 50,829,407
6 CDS 50,831,518 50,831,621
7 CDS 50,834,222 50,834,332
8 CDS 50,835,373 50,835,426
9 CDS 50,847,243 50,847,455
10 CDS 50,848,097 50,848,200
11 CDS 50,854,918 50,855,130
12 CDS 50,856,365 50,856,413
13 CDS 50,860,742 50,860,903
14 CDS 50,867,198 50,867,319
15 CDS 50,867,782 50,867,950
16 CDS 50,869,309 50,869,647
Other genome
Genome Chromosome Start End Links
hg38 chr12 50,400,929 50,476,463 Link
CDS sequence
ATGTTGCTTTTCGTGGAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTGCTCCTGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACATCAGGTGCTCATCCTGAGGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAAGGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCACTTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGCCAATTATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATCTATAGTCACCCCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCAACAGTACTCGGTCTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTCGACCATTCCAAAAAAATCGTGTGAAGCCTCAGTTTAGGTCATCTGGTGGTTCAGAACACTCAACAGAGGGCTCTGTATCCTTGGGGGATGGACAGTTGAACAGATATAGTTCAAGAAACTTTCCAGCTGAACGGCATAACCCCACAGTAACTGGGCATCAGGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGACTATGGTAGGGGCAGGAGAACTCTCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACCTCATCCTTCAACAGCTGAATCAAAGGCTCCAACACCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTACCTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGAGAATAGGATGTCTGATGTTGTTAAAGGTGTCTACAAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTGCAGATGAGCAGACAGAATGCACTTCTGCCCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCATTAAGCACAACTCAGCAAGAAAAGGATCTAATAGAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACCAGTTTCTCCTCCAAGTACTACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAGCTGTGGCTCTACAGGAACCCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTTGTGCAGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCCGTTGAGAAACCACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCCCAGGGGAGCAGCAGGAAAAATCAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGCAATATGTGCCACCCAGATCACCAAAGTAA
Amino sequence
MLLFVEVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSSIYSHPIQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGKEQYVPPRSPK*