ENST00000612161.4 SLC38A1

Information
Transcript ID
ENST00000612161.4
Genome
hg19
Position
chr12:46,589,910-46,633,678
Strand
-
CDS length
1,512
Amino acid length
504
Gene symbol
SLC38A1
Gene type
protein-coding
Gene description
solute carrier family 38 member 1
Gene Entrez Gene ID
81539
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 46,589,910 46,590,059
14 46,591,503 46,591,600
13 46,591,702 46,591,843
12 46,592,408 46,592,526
11 46,594,881 46,594,981
10 46,596,793 46,596,872
9 46,598,084 46,598,200
8 46,598,315 46,598,373
7 46,599,863 46,599,945
6 46,600,938 46,601,019
5 46,601,312 46,601,404
4 46,602,837 46,602,910
3 46,622,936 46,623,051
2 46,623,347 46,623,422
1 46,633,462 46,633,678
CDS
Exon number Type Start Stop
15 CDS 46,589,910 46,590,059
14 CDS 46,591,503 46,591,600
13 CDS 46,591,702 46,591,843
12 CDS 46,592,408 46,592,526
11 CDS 46,594,881 46,594,981
10 CDS 46,596,793 46,596,872
9 CDS 46,598,084 46,598,200
8 CDS 46,598,315 46,598,373
7 CDS 46,599,863 46,599,945
6 CDS 46,600,938 46,601,019
5 CDS 46,601,312 46,601,404
4 CDS 46,602,837 46,602,910
3 CDS 46,622,936 46,623,051
2 CDS 46,623,347 46,623,422
1 CDS 46,633,462 46,633,583
Other genome
Genome Chromosome Start End Links
hg38 chr12 46,196,127 46,239,895 Link
CDS sequence
ATGATGCATTTCAAAAGTGGACTCGAATTAACTGAGTTGCAAAACATGACAGTGCCCGAGGATGATAACATTAGCAATGACTCCAATGATTTCACCGAAGTAGAAAATGGTCAGATAAATAGCAAGTTTATTTCTGATCGTGAAAGTAGAAGAAGTCTCACAAACAGCCATTTGGAAAAAAAGAAGTGTGATGAGTATATTCCAGGTACAACCTCCTTAGGCATGTCTGTTTTTAACCTAAGCAACGCCATTATGGGCAGTGGGATTTTGGGACTCGCCTTTGCCCTGGCAAACACTGGAATCCTACTTTTTCTGGTACTTTTGACTTCAGTGACATTGCTGTCTATATATTCAATAAACCTCCTATTGATCTGTTCAAAAGAAACAGGCTGCATGGTGTATGAAAAGCTGGGGGAACAAGTCTTTGGCACCACAGGGAAGTTCGTAATCTTTGGAGCCACCTCTCTACAGAACACTGGAGCAATGCTGAGCTACCTCTTCATCGTAAAAAATGAACTACCCTCTGCCATAAAGTTTCTAATGGGAAAGGAAGAGACATTTTCAGCCTGGTACGTGGATGGCCGCGTTCTGGTGGTGATAGTTACCTTTGGCATAATTCTCCCTCTGTGTCTCTTGAAGAACTTAGGGTATCTTGGCTATACTAGTGGATTTTCCTTGAGCTGTATGGTTTTTTTCCTAATTGTGGTTATTTACAAGAAATTTCAAATTCCCTGCATTGTTCCAGAGCTAAATTCAACAATAAGTGCTAATTCAACAAATGCTGACACGTGTACGCCAAAATATGTTACCTTCAATTCAAAGACCGTGTATGCTTTACCCACCATTGCATTTGCATTTGTTTGCCACCCGTCAGTCCTGCCAATTTACAGTGAGCTTAAAGACCGATCACAGAAAAAAATGCAGATGGTTTCAAACATCTCCTTTTTCGCCATGTTTGTTATGTACTTCTTGACTGCCATTTTTGGCTACTTGACATTCTATGACAACGTGCAGTCCGACCTCCTTCACAAATATCAGAGTAAAGATGACATTCTCATCCTGACAGTGCGGCTGGCTGTCATTGTTGCTGTGATCCTCACAGTGCCGGTGTTATTTTTCACGGTTCGTTCATCTTTATTTGAACTGGCTAAGAAAACAAAGTTTAATTTATGTCGTCATACCGTGGTTACCTGCATACTCTTGGTTGTTATCAACTTGTTGGTGATCTTCATACCCTCCATGAAGGATATTTTTGGAGTCGTAGGAGTTACATCTGCTAACATGCTTATTTTCATTCTTCCTTCATCTCTTTATTTAAAAATCACAGACCAGGATGGAGATAAAGGAACTCAAAGAATTTGGCTCTTTCTCTTCCTCCAGTTTCCAGTCCAGCCCTGTTGGCTCTCAGAATGCATCATCCTTCTCCCTGCAGCGCTCTCACTGAACATGCTCAAGCGCAAGGAACTTATAATCTTGTGTTCTCTGGATTCTGGATTTAGTAATCTGTATTAG
Amino sequence
MMHFKSGLELTELQNMTVPEDDNISNDSNDFTEVENGQINSKFISDRESRRSLTNSHLEKKKCDEYIPGTTSLGMSVFNLSNAIMGSGILGLAFALANTGILLFLVLLTSVTLLSIYSINLLLICSKETGCMVYEKLGEQVFGTTGKFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRVLVVIVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISANSTNADTCTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYDNVQSDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFTVRSSLFELAKKTKFNLCRHTVVTCILLVVINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDGDKGTQRIWLFLFLQFPVQPCWLSECIILLPAALSLNMLKRKELIILCSLDSGFSNLY*