ENST00000465950.5 SCAF11

Information
Transcript ID
ENST00000465950.5
Genome
hg19
Position
chr12:46,315,192-46,323,748
Strand
-
CDS length
3,447
Amino acid length
1,149
Gene symbol
SCAF11
Gene type
protein-coding
Gene description
SR-related CTD associated factor 11
Gene Entrez Gene ID
9169
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 46,315,192 46,315,977
4 46,316,246 46,316,365
3 46,316,719 46,316,937
2 46,318,511 46,318,857
1 46,319,925 46,323,748
CDS
Exon number Type Start Stop
5 CDS 46,315,831 46,315,977
4 CDS 46,316,246 46,316,365
3 CDS 46,316,719 46,316,937
2 CDS 46,318,511 46,318,857
1 CDS 46,319,925 46,322,538
Other genome
Genome Chromosome Start End Links
hg38 chr12 45,921,409 45,929,965 Link
CDS sequence
ATGACAACTCCTACAAGGAGGTCTACACGTAACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCATCTTTAAGTGTTCCCTCTTCAGCTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTAAGAAGAGGAAGAAAACCACCTTTACTGAAAAAGAAACTTCGGAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACACATCACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAGTAGTAACATTTGTACTGTGCAGACTCATGTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTGCAATGAGCAAATAGAAGAAAGTGAGAAGCATACTGCAAATTATGATACAGAGGAAAGAGTAGGATCTTCATCTTCTGAGTCTTGTGCTCAAGATCTTCCTGTGCTAGTTGGTGAGGAAGGGGAAGTTAAAAAACTCGAGAATACAGGTATAGAGGCTAATGTTTTGTGTTTGGAAAGTGAGATTTCTGAAAATATTCTTGAAAAAGGAGGTGATCCATTGGAAAAGCAAGACCAGATATCTGGACTTTCACAATCAGAGGTAAAGACAGATGTATGTACAGTTCATCTTCCAAATGATTTTCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTTATCTGAGAATGTAGAGTCAGTGGTTAATGAAGAAAAAATAACAGAGAGTTCCCTAGTAGAAATTACTGAACATAAAGATTTTACACTAAAAACAGAGGAGCTTATAGAGAGCCCCAAGTTAGAATCTTCTGAGGGTGAAATTATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGATGTAGAAATAATTGCAACATGTGATACTTTTGGGAATGAAGATTTCAATAATATTCAAGACTCTGAAAATAACTTACTAAAAAATAATCTTCTGAACACCAAATTGGAAAAATCTTTAGAAGAAAAGAATGAATCGCTGACCGAACATCCTAGATCTACAGAGTTGCCTAAAACACACATTGAACAGATTCAGAAGCATTTTAGTGAGGACAACAATGAAATGATACCTATGGAGTGTGATTCATTTTGCAGTGACCAAAATGAATCTGAAGTTGAACCATCTGTAAATGCTGATCTTAAACAAATGAATGAAAATTCTGTGACACACTGTTCTGAAAATAATATGCCGTCTTCTGATCTTGCGGATGAAAAGGTTGAAACTGTTTCTCAACCATCTGAAAGCCCAAAAGATACCATAGATAAAACCAAAAAGCCTCGTACTCGAAGATCTAGATTTCATTCTCCATCTACAACTTGGTCACCCAACAAAGACACTCCACAAGAAAAGAAGCGGCCCCAGTCTCCATCTCCCAGAAGAGAAACTGGGAAAGAAAGCAGGAAGTCTCAATCACCATCTCCTAAGAATGAGTCAGCCAGAGGCCGGAAAAAATCCCGTTCTCAGTCCCCAAAAAAGGATATTGCAAGAGAAAGGAGGCAATCTCAGTCTCGGTCTCCAAAAAGGGATACTACTAGGGAAAGCAGAAGATCTGAATCACTGTCCCCAAGAAGAGAAACTTCTAGAGAGAACAAAAGATCTCAGCCAAGAGTGAAAGATTCTTCCCCAGGAGAAAAATCCAGGTCCCAGAGCAGAGAACGAGAAAGTGATAGAGATGGGCAGAGGAGAGAGAGAGAAAGGAGAACCAGAAAGTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCATCATTTGGTAGAATTGACAGAGATAGTTACTCTCCCCGGTGGAAGGGAAGATGGGCAAATGATGGTTGGAGATGTCCACGAGGAAATGATCGGTACAGAAAGAATGACCCAGAGAAACAGAATGAAAATACAAGAAAAGAAAAAAATGACATCCATCTAGATGCTGATGATCCAAATTCTGCTGACAAACATAGAAATGACTGTCCCAATTGGATAACAGAAAAAATAAACTCTGGGCCTGATCCAAGAACCAGAAATCCAGAAAAGTTGAAAGAGTCTCATTGGGAAGAAAATAGAAATGAAAATTCAGGAAATTCTTGGAATAAAAACTTTGGTTCTGGTTGGGTATCTAACCGTGGTAGAGGCAGAGGCAACCGTGGCAGAGGCACTTACAGAAGTAGTTTTGCCTATAAAGATCAGAATGAAAATCGGTGGCAAAATCGAAAACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAAAGTGAACAGGAGTTCTCATTTGATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGATGTACAAAACTACTACTCACGACGAGGCAGAAATTCTTCAGGTCCACAGTCTGGATGGATGAAACAAGAGGAGGAAACATCTGGACAGGATTCTAGCCTAAAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAGCTACCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAATCCATTTAACATTCATCCTCAGCTACCCTTGCATCTCCACACAGGAGTGCCCCTCATGCAGGTAGCCACTCCTACCAGTGTATCTCAGGGACTACCACCACCACCACCCCCTCCCCCACCATCCCAACAAGTCAACTACATTGCTTCACAACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTCTTCTCATGTAAGTAATAACATGAGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTTCGTCATCAAGTCACAGCAAAGCCTCTAATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGAAGACAGACAAGAAATTGCAAATTCAAGAAAAAGCAGCACAAGAGGTAAAATTGGCCATCAAGCCATTTTACCAAAATAAAGATATCACCAAGGAAGAATATAAAGAAATTGTACGGAAAGCAGTAGATAAAGTTTGTCATAGTAAGAGTGGAGAAGTAAATTCTACTAAAGTGGCAAATCTGGTTAAAGCCTATGTAGACAAATACAAATATTCACGGAAGGGGAGCCAAAAGAAAACTCTGGAAGAACCTGTGTCTACTGAAAAAAACATAGGCTGA
Amino sequence
MTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGNSNPSLSVPSSAESEKQTRQAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSPVLEKEHQPDVDSSNICTVQTHVENQSANCLKSCNEQIEESEKHTANYDTEERVGSSSSESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEKGGDPLEKQDQISGLSQSEVKTDVCTVHLPNDFPTCLTSESKVYQPVSCPLSDLSENVESVVNEEKITESSLVEITEHKDFTLKTEELIESPKLESSEGEIIQTVDRQSVKSPEVQLLGHVETEDVEIIATCDTFGNEDFNNIQDSENNLLKNNLLNTKLEKSLEEKNESLTEHPRSTELPKTHIEQIQKHFSEDNNEMIPMECDSFCSDQNESEVEPSVNADLKQMNENSVTHCSENNMPSSDLADEKVETVSQPSESPKDTIDKTKKPRTRRSRFHSPSTTWSPNKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQPRVKDSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPSRCRTKSKSSSFGRIDRDSYSPRWKGRWANDGWRCPRGNDRYRKNDPEKQNENTRKEKNDIHLDADDPNSADKHRNDCPNWITEKINSGPDPRTRNPEKLKESHWEENRNENSGNSWNKNFGSGWVSNRGRGRGNRGRGTYRSSFAYKDQNENRWQNRKPLSGNSNSSGSESFKFVEQQSYKRKSEQEFSFDTPADRSGWTSASSWAVRKTLPADVQNYYSRRGRNSSGPQSGWMKQEEETSGQDSSLKDQTNQQVDGSQLPINMMQPQMNVMQQQMNAQHQPMNIFPYPVGVHAPLMNIQRNPFNIHPQLPLHLHTGVPLMQVATPTSVSQGLPPPPPPPPPSQQVNYIASQPDGKQLQGIPSSSHVSNNMSTPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVEASADSSKTDKKLQIQEKAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKVCHSKSGEVNSTKVANLVKAYVDKYKYSRKGSQKKTLEEPVSTEKNIG*