ENST00000542983.1 SINHCAF

Information
Transcript ID
ENST00000542983.1
Genome
hg19
Position
chr12:31,435,622-31,479,133
Strand
-
CDS length
222
Amino acid length
74
Gene symbol
SINHCAF
Gene type
protein-coding
Gene description
SIN3-HDAC complex associated factor
Gene Entrez Gene ID
58516
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 31,435,622 31,435,805
4 31,440,568 31,440,718
3 31,446,739 31,446,865
2 31,448,168 31,448,267
1 31,478,958 31,479,133
CDS
Exon number Type Start Stop
5 CDS 31,435,646 31,435,805
4 CDS 31,440,568 31,440,629
Other genome
Genome Chromosome Start End Links
hg38 chr12 31,282,688 31,326,199 Link
CDS sequence
ATGGCTTCTGGTTCTAACAGAACACCAGTTTTTTCCTTTTTAGATCTCACTTACTGGAAAAGACAGAAGATATGTTGTGGGATCATCTATAAAGGCCGTTTTGGGGAAGTCCTCATTGACACACATCTCTTCAAGCCTTGCTGCAGCAATAAGAAAGCAGCTGCTGAGAAGCCAGAGGAGCAGGGGCCAGAGCCTCTGCCCATCTCCACTCAGGAGTGGTGA
Amino sequence
MASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW*