ENST00000279068.11 LSM14B
Information
- Transcript ID
- ENST00000279068.11
- Genome
- hg38
- Position
- chr20:62,122,475-62,135,374
- Strand
- +
- CDS length
- 1,158
- Amino acid length
- 386
- Gene symbol
- LSM14B
- Gene type
- protein-coding
- Gene description
- LSM family member 14B
- Gene Entrez Gene ID
- 149986
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 62,122,475 | 62,122,793 |
| 2 | 62,124,617 | 62,124,780 |
| 3 | 62,126,304 | 62,126,439 |
| 4 | 62,129,785 | 62,129,952 |
| 5 | 62,130,219 | 62,130,296 |
| 6 | 62,130,530 | 62,130,691 |
| 7 | 62,131,356 | 62,131,506 |
| 8 | 62,133,290 | 62,133,475 |
| 9 | 62,134,163 | 62,135,374 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 62,122,667 | 62,122,793 |
| 2 | CDS | 62,124,617 | 62,124,780 |
| 3 | CDS | 62,126,304 | 62,126,439 |
| 4 | CDS | 62,129,785 | 62,129,952 |
| 5 | CDS | 62,130,219 | 62,130,296 |
| 6 | CDS | 62,130,530 | 62,130,691 |
| 7 | CDS | 62,131,356 | 62,131,506 |
| 8 | CDS | 62,133,290 | 62,133,461 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 60,697,531 | 60,710,430 | Link |
CDS sequence
ATGAGCGGCTCCTCAGGCACCCCGTATCTGGGCAGCAAGATCAGCCTCATCTCCAAGGCGCAGATCCGCTACGAGGGCATTCTCTACACCATCGACACCGACAACTCCACCGTGGCGCTCGCCAAAGTGAGGTCCTTTGGCACTGAAGACCGTCCCACAGATAGGCCTGCGCCCCCCAGAGAGGAGATTTATGAGTACATCATTTTCCGAGGAAGTGACATCAAGGATATCACTGTGTGTGAACCTCCGAAAGCTCAGCACACACTCCCGCAGGATCCCGCCATTGTTCAGTCTTCCCTGGGTTCTGCCTCCGCCTCGCCCTTCCAGCCGCACGTGCCTTACAGCCCTTTCCGAGGGATGGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCCAGCAGTATGCCGCCTCCCTGGGTCTAGGAGCTGGTTTTCCATCCATCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTGCAGACTGGTTCTGCTGACAACCTGAATGCTAAAAAGCTGTTACCTGGCAAGGGCACCACAGGGACGCAGCTCAACGGTCGTCAGGCCCAGCCGAGCAGCAAGACGGCCAGCGATGTAGTCCAGCCGGCAGCTGTGCAAGCTCAAGGGCAGGTGAATGACGAGAACAGAAGACCTCAGAGGAGGCGATCAGGAAACAGGCGAACAAGGAATCGCTCCAGAGGGCAAAACCGTCCAACTAACGTTAAGGAAAACACAATCAAATTTGAGGGTGACTTTGATTTCGAGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTGACAAAGAATTTAAGAAGAAACTGAATTTTAAAGATGACAAGGCTGAGAAGGGGGAAGAGAAGGACCTGGCTGTGGTGACCCAGAGTGCCGAAGCGCCCGCTGAGGAAGACCTTCTGGGGCCCAACTGCTACTATGACAAATCCAAGTCGTTCTTCGACAACATCTCTTCTGAACTCAAGACCAGCTCCAGGCGGACGACGTGGGCCGAAGAGAGGAAGCTCAACACAGAGACCTTTGGGGTGTCAGGGAGGTTTCTTCGTGGCCGCAGTTCTCGGGGCGGATTCCGAGGAGGCAGGGGCAATGGGACCACCCGTCGCAACCCCACTTCCCACAGGGCCGGGACTGGCAGGGTGTGA
Amino sequence
MSGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEIYEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSLGSASASPFQPHVPYSPFRGMAPYGPLAASSLLSQQYAASLGLGAGFPSIPVGKSPMVEQAVQTGSADNLNAKKLLPGKGTTGTQLNGRQAQPSSKTASDVVQPAAVQAQGQVNDENRRPQRRRSGNRRTRNRSRGQNRPTNVKENTIKFEGDFDFESANAQFNREELDKEFKKKLNFKDDKAEKGEEKDLAVVTQSAEAPAEEDLLGPNCYYDKSKSFFDNISSELKTSSRRTTWAEERKLNTETFGVSGRFLRGRSSRGGFRGGRGNGTTRRNPTSHRAGTGRV*