ENST00000538603.6 FAM90A1
Information
- Transcript ID
- ENST00000538603.6
- Genome
- hg19
- Position
- chr12:8,373,856-8,380,214
- Strand
- -
- CDS length
- 1,395
- Amino acid length
- 465
- Gene symbol
- FAM90A1
- Gene type
- protein-coding
- Gene description
- family with sequence similarity 90 member A1
- Gene Entrez Gene ID
- 55138
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 8,373,856 | 8,375,380 |
| 6 | 8,376,045 | 8,376,153 |
| 5 | 8,376,612 | 8,376,811 |
| 4 | 8,377,306 | 8,377,484 |
| 3 | 8,378,432 | 8,378,588 |
| 2 | 8,378,868 | 8,379,074 |
| 1 | 8,380,076 | 8,380,214 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 8,374,418 | 8,375,380 |
| 6 | CDS | 8,376,045 | 8,376,153 |
| 5 | CDS | 8,376,612 | 8,376,811 |
| 4 | CDS | 8,377,306 | 8,377,428 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 8,221,260 | 8,227,618 | Link |
CDS sequence
ATGATGGCACGTCGTGACCCCAAACCTGGGGCAAAGAGACTGGTGAGAGCCCAGACCCTCCAGAAGCAGCGGAGGGCCCCAGTTGGGCCAAGGGCTCCCCCGCCCGATGAAGAAGATCCCAGGCTCAAGTGCAAAAACTGTGAGGCCTTTGGCCACACGGCCAGAAGTACCAGGTGCCCCATGAAGTGCTGGAAGGCAGCCCTGGTTCCACCGAACTTTGGGGAAAAGGAAGGGAAGGAAAACCTGAAACCATGGAAGCCCCAGGTTGAAGCGAACCCTGGGCCCTTGAACAAGGATAAGGGAGAGAAGGAAGAGAGACCAAGGCCACAAGACCCGCAGAGGAAGGCTCTCCTCCACATATTTTCCAGGAAACCTCCAGAGAAGCCGCTGCCAAATCAAAAAGGATCCACGGAATCTTCTGATTATCTGAGGGTTGCAAGCGGGCCAATGCCGGTCCACACAACCAGTAAGAGGCCGCGTGTGGACCCTGTCCTCTCTGATCGCTCAGCTACCGAAATGTCTGACAGGGGCTCCGTCTTAGCTTCACTGTCTCCCCTCAGAAAAGCCAGTCTGAGCTCCTCCTCAAGTCTTGGACCAAAGGAAAGACAGACAGGGGCTGCGGCCGACATCCCTCAGACTGCAGTCAGGCACCAGGGCCCCGAGCCTCTCCTCGTGGTGAAGCCGACACACAGCAGCCCTGCGGGTGGCTGTCGAGAAGTTCCCCAGGCTGCCTCCAAAACCCACGGCCTGCTCCAGGCCGTCAGCCCCCAGGCACAAGACAAACGTCCTGCGGTGACCTCACAGCCCTGCCCACCAGCCGCCACACACAGCTTGGGCCTAGGCTCCAATCTCAGCTTCGGGCCAGGAGCCAAGAGATCTGCCCCGGCTCCGATTCAGGCTTGCCTGAACTTCCCCAAGAAACCGAGACTGGGTCCCTTCCAGATCCCCGAAAGCGCCATCCAGGGAGGTGAGCTGGGGGCCCCGGAGAATCTCCAACCTCCGCCAGCCGCAACCGAACTTGGACCACGTACGTCACCCCAGACAGGCACGAGGACACCCGCCCAGGTGCTTAGCGGCGACCGGCAGCCTCCGCACAGCAGACCTTGCCTGCCTACTGCCCAGGCCTGCACCATGTCCCATCACCCAGCGGCCAGCCATGATGGGGCCCAGCCTCTCAGAGTGCTCTTTCGGAGACTGGAAAACGGACGCTGGAGCTCCAGCCTGCTGACGGCCCCCTCATTTCACTCTCCTGAGAAGCCGGGAGCCTTCCTCGCTCAGAGCCCTCATGTCTCAGAGAAGTCTGAGGGTCCCTGTGTTCGTGTCCCACCAAGCGTCCTCTATGAGGACCTTCAGGTTCCCTCCTCCTCAGAGGACAGCGATTCTGACCTGGAGTGA
Amino sequence
MMARRDPKPGAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCEAFGHTARSTRCPMKCWKAALVPPNFGEKEGKENLKPWKPQVEANPGPLNKDKGEKEERPRPQDPQRKALLHIFSRKPPEKPLPNQKGSTESSDYLRVASGPMPVHTTSKRPRVDPVLSDRSATEMSDRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQTAVRHQGPEPLLVVKPTHSSPAGGCREVPQAASKTHGLLQAVSPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRSAPAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPRTSPQTGTRTPAQVLSGDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPLRVLFRRLENGRWSSSLLTAPSFHSPEKPGAFLAQSPHVSEKSEGPCVRVPPSVLYEDLQVPSSSEDSDSDLE*