ENST00000428177.2 FOXJ2
Information
- Transcript ID
- ENST00000428177.2
- Genome
- hg19
- Position
- chr12:8,185,956-8,202,818
- Strand
- +
- CDS length
- 1,581
- Amino acid length
- 527
- Gene symbol
- FOXJ2
- Gene type
- protein-coding
- Gene description
- forkhead box J2
- Gene Entrez Gene ID
- 55810
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 8,185,956 | 8,186,429 |
2 | 8,192,415 | 8,192,761 |
3 | 8,195,254 | 8,195,328 |
4 | 8,196,297 | 8,196,365 |
5 | 8,196,547 | 8,196,687 |
6 | 8,197,356 | 8,197,554 |
7 | 8,200,478 | 8,200,885 |
8 | 8,201,293 | 8,201,394 |
9 | 8,201,958 | 8,202,818 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
2 | CDS | 8,192,429 | 8,192,761 |
3 | CDS | 8,195,254 | 8,195,328 |
4 | CDS | 8,196,297 | 8,196,365 |
5 | CDS | 8,196,547 | 8,196,687 |
6 | CDS | 8,197,356 | 8,197,554 |
7 | CDS | 8,200,478 | 8,200,885 |
8 | CDS | 8,201,293 | 8,201,394 |
9 | CDS | 8,201,958 | 8,202,211 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr12 | 8,033,360 | 8,050,222 | Link |
CDS sequence
ATGGCTTCTGACCTAGAGAGTAGCCTCACCTCCATAGACTGGCTCCCCCAGCTGACCCTCCGAGCTACCATTGAGAAGCTTGGAAGTGCCTCCCAGGCTGGGCCTCCCGGGAGCAGCCGCAAGTGTTCACCAGGGTCACCCACAGATCCTAATGCCACCCTGAGCAAAGACGAGGCAGCAGTGCACCAGGACGGCAAGCCACGATACAGCTATGCCACTCTCATCACCTATGCCATCAACTCCTCTCCAGCCAAGAAGATGACCCTCAGCGAGATTTACCGCTGGATCTGTGATAACTTCCCCTATTACAAGAATGCTGGCATTGGTTGGAAGAATTCAATACGGCACAACCTTTCTCTCAACAAGTGTTTCCGGAAGGTGCCCAGACCTCGGGATGACCCTGGGAAGGGTTCCTATTGGACAATTGACACCTGCCCTGACATTTCCCGAAAGAGAAGACACCCTCCAGATGATGATCTGTCCCAAGACTCACCAGAACAGGAGGCAAGCAAGAGCCCACGGGGAGGCGTTGCAGGGAGTGGAGAAGCCTCACTGCCTCCTGAGGGGAATCCGCAGATGTCACTTCAGAGCCCCACATCTATAGCCAGCTACAGCCAGGGCACAGGATCTGTGGATGGTGGAGCAGTGGCAGCAGGGGCTTCAGGCCGAGAAAGTGCTGAGGGTCCCCCTCCCCTCTATAACACCAACCATGACTTTAAATTCTCCTACTCAGAGATCAACTTTCAGGATCTAAGCTGGTCCTTCCGCAACCTCTATAAGTCCATGCTGGAGAAGTCCTCTTCCTCCTCTCAGCACGGCTTTTCTTCTCTCCTGGGGGACATCCCACCCTCGAACAACTACTACATGTATCAGCAGCAGCAGCCACCGCCACCTCAACAGCAGCAGCAGCAGCAGCAGCCGCCACAGCCACCTCCCCAGCAGTCCCAGCCACAGCAGCAGCAGGCACCTGCCCAGGGCCCCTCAGCTGTAGGGGGTGCTCCTCCACTGCACACCCCAAGCACAGATGGTTGTACCCCACCAGGGGGAAAGCAAGCTGGGGCGGAAGGCTATGGGCCTCCCCCTGTAATGGCCATGCATCCACCCCCGCTGCAGCATGGAGGCTACCACCCTCATCAGCACCATCCCCACTCCCACCCTGCCCAGCAGCCACCACCTCCACAGCCACAGGCACAAGGCCAGGCTCCCATCAACAACACTGGCTTTGCCTTTCCTTCTGACTGGTGCTCTAATATTGACTCTTTAAAGGAAAGCTTCAAGATGGTGAATCGGCTCAATTGGTCCAGCATTGAGCAGTCACAATTCTCAGAACTGATGGAGAGTCTACGACAGGCAGAGCAGAAGAACTGGACCCTCGACCAGCATCACATTGCCAATCTGTGTGACTCCCTCAACCACTTCCTTACTCAGACTGGTCACGTGCCCCCTCAAGGGGGTACCCACCGCCCACCAGCCCCTGCCCGTATTGCTGACTCCTGTGCCCTCACCAGTGGCAAACAGGAGTCAGCCATGAGCCAAGGTACTGCACCAAGCCAGTTGCCATGGAGGTGGAGACTATGTTGA
Amino sequence
MASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGSSRKCSPGSPTDPNATLSKDEAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVAGSGEASLPPEGNPQMSLQSPTSIASYSQGTGSVDGGAVAAGASGRESAEGPPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLEKSSSSSQHGFSSLLGDIPPSNNYYMYQQQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEGYGPPPVMAMHPPPLQHGGYHPHQHHPHSHPAQQPPPPQPQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQKNWTLDQHHIANLCDSLNHFLTQTGHVPPQGGTHRPPAPARIADSCALTSGKQESAMSQGTAPSQLPWRWRLC*