ENST00000622489.4 LRRC23
Information
- Transcript ID
- ENST00000622489.4
- Genome
- hg19
- Position
- chr12:7,013,897-7,023,405
- Strand
- +
- CDS length
- 609
- Amino acid length
- 203
- Gene symbol
- LRRC23
- Gene type
- protein-coding
- Gene description
- leucine rich repeat containing 23
- Gene Entrez Gene ID
- 10233
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 7,013,897 | 7,014,067 |
| 2 | 7,014,749 | 7,014,923 |
| 3 | 7,015,009 | 7,015,118 |
| 4 | 7,015,573 | 7,015,826 |
| 5 | 7,023,055 | 7,023,405 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 7,014,798 | 7,014,923 |
| 3 | CDS | 7,015,009 | 7,015,118 |
| 4 | CDS | 7,015,573 | 7,015,826 |
| 5 | CDS | 7,023,055 | 7,023,173 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 6,904,733 | 6,914,241 | Link |
CDS sequence
ATGTCAGATGAAGATGATCTAGAAGACTCTGAGCCAGACCAGGATGATTCTGAGAAAGAAGAGGACGAGAAGGAGACAGAGGAGGGGGAGGACTACAGAAAAGAGGGGGAAGAGTTCCCTGAGGAATGGCTGCCCACCCCCCTCACGGAGGACATGATGAAGGAAGGGCTTTCTCTGCTCTGTAAGACAGGCAATGGGCTGGCTCATGCTTATGTCAAGCTGGAGGTTAAAGAGAGGGACCTGACAGACATCTACTTGCTGCGCTCCTACATCCATCTGCGCTATGTGGATATTTCTGAGAACCACCTGACAGACCTGTCTCCACTCAACTACCTCACCCACCTGCTCTGGCTCAAGGCTGATGGCAATCGGCTGCGAAGTGCCCAGATGAATGAACTGCCCTACCTGCAGATTGCTAGTTTTGCTTATAACCAGATTACTGACACTGAAGGCATCTCTCATCCTCGTCTTGAAACCCTGAATCTCAAAGGAGATCAAAGACGCTGGCCTTCAGACCTGATCAGACTCCCAGGGGCAGCCACCACATGTATGACAGAGAACAGAGGATGCCTGTTTTTGCCCCAAAGCTGGAAATTCATCACAACCTGA
Amino sequence
MSDEDDLEDSEPDQDDSEKEEDEKETEEGEDYRKEGEEFPEEWLPTPLTEDMMKEGLSLLCKTGNGLAHAYVKLEVKERDLTDIYLLRSYIHLRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTEGISHPRLETLNLKGDQRRWPSDLIRLPGAATTCMTENRGCLFLPQSWKFITT*