ENST00000305738.10 PATE1
Information
- Transcript ID
- ENST00000305738.10
- Genome
- hg19
- Position
- chr11:125,616,174-125,619,762
- Strand
- +
- CDS length
- 381
- Amino acid length
- 127
- Gene symbol
- PATE1
- Gene type
- protein-coding
- Gene description
- prostate and testis expressed 1
- Gene Entrez Gene ID
- 160065
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 125,616,174 | 125,616,251 |
| 2 | 125,616,556 | 125,616,591 |
| 3 | 125,617,271 | 125,617,306 |
| 4 | 125,617,595 | 125,617,717 |
| 5 | 125,618,495 | 125,619,762 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 125,616,200 | 125,616,251 |
| 2 | CDS | 125,616,556 | 125,616,591 |
| 3 | CDS | 125,617,271 | 125,617,306 |
| 4 | CDS | 125,617,595 | 125,617,717 |
| 5 | CDS | 125,618,495 | 125,618,628 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 125,746,279 | 125,749,867 | Link |
CDS sequence
ATGGACAAGTCCCTCTTGCTGGAACTCCCCATCCTGCTCTGCTGCTTTAGGGCATTATCTGGATCACTTTCAATGAGAAATGATGCAGTCAATGAAATAGTTGCTGTGAAAAACAATTTTCCTGTGATAGAAATTGTTCAGTGTAGGATGTGCCACCTCCAGTTCCCAGGAGAAAAGTGCTCCAGAGGAAGAGGAATATGCACAGCAACAACAGAAGAGGCCTGCATGGTTGGAAGGATGTTCAAAAGGGATGGTAATCCCTGGTTAACCTTCATGGGCTGCCTAAAGAACTGTGCTGATGTGAAAGGCATAAGGTGGAGTGTCTATTTGGTGAACTTCAGGTGCTGCAGGAGCCATGACCTGTGCAATGAAGACCTTTAG
Amino sequence
MDKSLLLELPILLCCFRALSGSLSMRNDAVNEIVAVKNNFPVIEIVQCRMCHLQFPGEKCSRGRGICTATTEEACMVGRMFKRDGNPWLTFMGCLKNCADVKGIRWSVYLVNFRCCRSHDLCNEDL*