ENST00000227135.7 SPA17
Information
- Transcript ID
- ENST00000227135.7
- Genome
- hg19
- Position
- chr11:124,543,800-124,567,414
- Strand
- +
- CDS length
- 456
- Amino acid length
- 152
- Gene symbol
- SPA17
- Gene type
- protein-coding
- Gene description
- sperm autoantigenic protein 17
- Gene Entrez Gene ID
- 53340
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 124,543,800 | 124,543,848 |
| 2 | 124,545,134 | 124,545,314 |
| 3 | 124,551,285 | 124,551,355 |
| 4 | 124,561,592 | 124,561,678 |
| 5 | 124,564,199 | 124,567,414 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 124,545,161 | 124,545,314 |
| 3 | CDS | 124,551,285 | 124,551,355 |
| 4 | CDS | 124,561,592 | 124,561,678 |
| 5 | CDS | 124,564,199 | 124,564,342 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 124,673,904 | 124,697,518 | Link |
CDS sequence
ATGTCGATTCCATTCTCCAACACCCACTACCGAATTCCACAAGGATTTGGGAATCTTCTTGAAGGGCTGACACGCGAGATTCTGAGAGAGCAACCGGACAATATACCAGCTTTTGCAGCAGCCTATTTTGAGAGCCTTCTAGAGAAAAGAGAGAAAACCAACTTTGATCCAGCAGAATGGGGGAGTAAGGTAGAAGACCGCTTCTATAACAATCATGCATTCGAGGAGCAAGAACCACCTGAGAAAAGTGATCCTAAACAAGAAGAGTCTCAGATATCTGGGAAGGAGGAAGAGACATCAGTCACCATCTTAGACTCTTCTGAGGAAGATAAGGAAAAAGAAGAGGTTGCTGCTGTCAAAATCCAAGCTGCCTTCCGGGGACACATAGCCAGAGAGGAGGCAAAGAAAATGAAAACAAATAGTCTTCAAAATGAGGAAAAAGAGGAAAACAAGTGA
Amino sequence
MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK*