ENST00000531468.2 NECTIN1

Information
Transcript ID
ENST00000531468.2
Genome
hg19
Position
chr11:119,494,120-119,599,263
Strand
-
CDS length
1,482
Amino acid length
494
Gene symbol
NECTIN1
Gene type
protein-coding
Gene description
nectin cell adhesion molecule 1
Gene Entrez Gene ID
5818
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 119,494,120 119,494,459
9 119,499,806 119,499,987
8 119,508,844 119,508,957
7 119,509,441 119,509,516
6 119,510,575 119,510,722
5 119,545,869 119,546,020
4 119,547,812 119,547,929
3 119,548,265 119,548,567
2 119,549,125 119,549,475
1 119,599,185 119,599,263
CDS
Exon number Type Start Stop
9 CDS 119,499,847 119,499,987
8 CDS 119,508,844 119,508,957
7 CDS 119,509,441 119,509,516
6 CDS 119,510,575 119,510,722
5 CDS 119,545,869 119,546,020
4 CDS 119,547,812 119,547,929
3 CDS 119,548,265 119,548,567
2 CDS 119,549,125 119,549,475
1 CDS 119,599,185 119,599,263
Other genome
Genome Chromosome Start End Links
hg38 chr11 119,623,408 119,728,553 Link
CDS sequence
ATGGCTCGGATGGGGCTTGCGGGCGCCGCTGGACGCTGGTGGGGACTCGCTCTCGGCTTGACCGCATTCTTCCTCCCAGGCGTCCACTCCCAGGTGGTCCAGGTGAACGACTCCATGTATGGCTTCATCGGCACAGACGTGGTTCTGCACTGCAGCTTTGCCAACCCGCTTCCCAGCGTGAAGATCACCCAGGTCACATGGCAGAAGTCCACCAATGGCTCCAAGCAGAACGTGGCCATCTACAACCCATCCATGGGCGTGTCCGTGCTGGCTCCCTACCGCGAGCGTGTGGAATTCCTGCGGCCCTCCTTCACCGATGGCACTATCCGCCTCTCCCGCCTGGAGCTGGAGGATGAGGGTGTCTACATCTGCGAGTTTGCTACCTTCCCTACGGGCAATCGAGAAAGCCAGCTCAATCTCACGGTGATGGCCAAACCCACCAATTGGATAGAGGGTACCCAGGCAGTGCTTCGAGCCAAGAAGGGGCAGGATGACAAGGTCCTGGTGGCCACCTGCACCTCAGCCAATGGGAAGCCTCCCAGTGTGGTATCCTGGGAAACTCGGTTAAAAGGTGAGGCAGAGTACCAGGAGATCCGGAACCCCAATGGCACAGTGACGGTCATCAGCCGCTACCGCCTGGTGCCCAGCAGGGAAGCCCACCAGCAGTCCTTGGCCTGCATCGTCAACTACCACATGGACCGCTTCAAGGAAAGCCTCACTCTCAACGTGCAGTATGAGCCTGAGGTAACCATTGAGGGGTTTGATGGCAACTGGTACCTGCAGCGGATGGACGTGAAGCTCACCTGCAAAGCTGATGCTAACCCCCCAGCCACTGAGTACCACTGGACCACGCTAAATGGCTCTCTCCCCAAGGGTGTGGAGGCCCAGAACAGAACCCTCTTCTTCAAGGGACCCATCAACTACAGCCTGGCAGGGACCTACATCTGTGAGGCCACCAACCCCATCGGTACACGCTCAGGCCAGGTGGAGGTCAATATCACAGAAAAGCCCCGCCCCCAGAGGGGTCTGGGAAGTGCAGCCAGGCTCCTGGCGGGCACCGTGGCCGTGTTCCTCATCCTAGTTGCTGTGCTCACTGTCTTCTTCCTGTACAACCGGCAGCAGAAGAGCCCACCGGAGACGGATGGGGCCGGGACCGACCAGCCCCTCTCCCAGAAGCCGGAGCCTTCTCCCAGCAGGCAAAGCTCCCTTGTGCCTGAGGATATCCAGGTTGTCCACCTGGACCCAGGGAGGCAGCAGCAGCAAGAAGAGGAGGACTTGCAGAAGCTGTCCCTGCAGCCCCCCTACTATGATCTGGGGGTCTCCCCCTCCTACCACCCCTCGGGCTCTGGCCTAAAGGACACTCACAGCCACTATGCAGAGCTGGACACCTCTGCCCTGGAACTCGTGCCAGGGCTGCGGACCCCCGTGCCAGGGCCTGCAGAGGCTGTGGAATATGCCACCATCCAGTTGAGCCCACCCTAG
Amino sequence
MARMGLAGAAGRWWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEKPRPQRGLGSAARLLAGTVAVFLILVAVLTVFFLYNRQQKSPPETDGAGTDQPLSQKPEPSPSRQSSLVPEDIQVVHLDPGRQQQQEEEDLQKLSLQPPYYDLGVSPSYHPSGSGLKDTHSHYAELDTSALELVPGLRTPVPGPAEAVEYATIQLSPP*