ENST00000621676.5 VPS11

Information
Transcript ID
ENST00000621676.5
Genome
hg19
Position
chr11:118,938,529-118,952,682
Strand
+
CDS length
2,825
Amino acid length
941.667
Gene symbol
VPS11
Gene type
protein-coding
Gene description
VPS11 core subunit of CORVET and HOPS complexes
Gene Entrez Gene ID
55823
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 118,938,529 118,938,721
2 118,939,907 118,939,939
3 118,939,940 118,940,054
4 118,940,152 118,940,287
5 118,940,944 118,941,107
6 118,942,306 118,942,553
7 118,943,908 118,944,109
8 118,944,510 118,944,661
9 118,947,607 118,947,793
10 118,948,211 118,948,357
11 118,948,588 118,948,776
12 118,948,883 118,949,044
13 118,949,275 118,949,414
14 118,949,505 118,949,707
15 118,949,839 118,950,010
16 118,951,802 118,952,024
17 118,952,169 118,952,682
CDS
Exon number Type Start Stop
1 CDS 118,938,535 118,938,721
2 CDS 118,939,907 118,939,939
3 CDS 118,939,940 118,940,054
4 CDS 118,940,152 118,940,287
5 CDS 118,940,944 118,941,107
6 CDS 118,942,306 118,942,553
7 CDS 118,943,908 118,944,109
8 CDS 118,944,510 118,944,661
9 CDS 118,947,607 118,947,793
10 CDS 118,948,211 118,948,357
11 CDS 118,948,588 118,948,776
12 CDS 118,948,883 118,949,044
13 CDS 118,949,275 118,949,414
14 CDS 118,949,505 118,949,707
15 CDS 118,949,839 118,950,010
16 CDS 118,951,802 118,952,024
17 CDS 118,952,169 118,952,333
Other genome
Genome Chromosome Start End Links
hg38 chr11 119,067,818 119,081,972 Link
CDS sequence
ATGGCGGCCTACCTGCAGTGGCGGCGCTTCGTTTTCTTCGACAAGGAGCTGGTGAAGGAGCCGCTGAGCAATGATGGGGCCGCTCCCGGGGCCACACCTGCTTCTGGATCCGCTGCTTCCAAGTTCCTTTGCCTCCCTCCTGGCATCACTGTCTGCGACTCAGGCCGAGGGAGCCTGGTCTTTGGAGATATGGAAGGCCAGATCTGGTTCTTGCCACGTTCCTACAGCTTACAGGCTTCCAAGCCTACAAACTACGGGTGACACACCTGTACCAACTGAAGCAGCACAATATTCTGGCATCTGTTGGAGAAGATGAAGAGGGCATCAACCCCTTGGTTAAGATCTGGAACCTGGAGAAGAGAGATGGTGGCAATCCACTCTGCACTCGAATCTTCCCTGCTATTCCAGGAACAGAGCCAACTGTTGTATCTTGTTTGACTGTCCATGAAAATCTCAACTTTATGGCCATTGGTTTCACAGATGGCAGTGTTACATTGAACAAAGGAGACATCACCCGGGACCGGCATAGCAAGACCCAGATTTTGCACAAGGGCAACTATCCTGTAACTGGATTGGCCTTTCGCCAAGCAGGAAAGACCACTCACTTGTTTGTTGTGACAACAGAGAACGTCCAGTCCTATATAGTTTCTGGAAAAGACTACCCTCGCGTGGAGTTGGACACCCATGGTTGTGGCCTGCGCTGCTCAGCCCTAAGTGACCCTTCTCAGGACCTGCAGTTCATTGTGGCCGGGGATGAGTGTGTCTACTTGTACCAGCCTGATGAACGTGGGCCCTGCTTCGCCTTTGAGGGCCATAAGCTCATTGCCCACTGGTTTAGAGGCTACCTTATCATTGTCTCCCGTGACCGGAAGGTTTCTCCCAAGTCAGAGTTTACCAGCAGGGATTCACAGAGCTCCGACAAGCAGATTCTAAACATCTATGACCTGTGCAACAAGTTCATAGCCTATAGCACCGTCTTTGAGGATGTAGTGGATGTGCTTGCTGAGTGGGGCTCCCTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCACTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTTTAAGAAGAACCTATTTGAGATGGCGATTAACCTTGCCAAGAGCCAGCATCTGGACAGTGATGGGCTGGCCCAGATTTTCATGCAGTATGGAGACCATCTCTACAGCAAGGGCAACCACGATGGGGCTGTCCAGCAATATATCCGAACCATTGGAAAGTTGGAGCCATCCTACGTGATCCGCAAGTTTCTGGATGCCCAGCGCATTCACAACCTGACTGCCTACCTGCAGACCCTGCACCGACAATCCCTGGCCAATGCCGACCATACCACCCTGCTCCTCAACTGCTATACCAAGCTCAAGGACAGCTCGAAGCTGGAGGAGTTCATCAAGAAAAAGAGTGAGAGTGAAGTCCACTTTGATGTGGAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTGTATCTGGCGGAGAACCATGCACATCATGAGTGGTACCTGAAGATCCAGCTAGAAGACATTAAGAATTATCAGGAAGCCCTTCGATACATCGGCAAGCTGCCTTTTGAGCAGGCAGAGAGCAACATGAAGCGCTACGGCAAGATCCTCATGCACCACATACCAGAGCAGACAACTCAGTTGCTGAAGGGACTTTGTACTGATTATCGGCCCAGCCTCGAAGGCCGCAGCGATAGGGAGGCCCCAGGCTGCAGGGCCAACTCTGAGGAGTTCATCCCCATCTTTGCCAATAACCCGCGAGAGCTGAAAGCCTTCCTAGAGCACATGAGTGAAGTGCAGCCAGACTCACCCCAGGGGATCTACGACACACTCCTTGAGCTGCGACTGCAGAACTGGGCCCACGAGAAGGATCCACAGGTCAAAGAGAAGCTTCACGCAGAGGCCATTTCCCTGCTGAAGAGTGGTCGCTTCTGCGACGTCTTTGACAAGGCCCTGGTCCTGTGCCAGATGCACGACTTCCAGGATGGTGTCCTTTACCTTTATGAGCAGGGGAAGCTGTTCCAGCAGATCATGCACTACCACATGCAGCACGAGCAGTACCGGCAGGTCATCAGCGTGTGTGAGCGCCATGGGGAGCAGGACCCCTCCTTGTGGGAGCAGGCCCTCAGCTACTTCGCTCGCAAGGAGGAGGACTGCAAGGAGTATGTGGCAGCTGTCCTCAAGCATATCGAGAACAAGAACCTCATGCCACCTCTTCTAGTGGTGCAGACCCTGGCCCACAACTCCACAGCCACACTCTCCGTCATCAGGGACTACCTGGTCCAAAAACTACAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTGCGGGTGCGGCGGTACCGAGAGGAGACCACCCGTATCCGCCAGGAGATCCAAGAGCTCAAGGCCAGTCCTAAGATTTTCCAAAAGACCAAGTGCAGCATCTGTAACAGTGCCTTGGAGTTGCCCTCAGTCCACTTCCTGTGTGGCCACTCCTTCCACCAACACTGCTTTGAGAGTTACTCGGAAAGTGATGCTGACTGCCCCACCTGCCTCCCTGAAAACCGGAAGGTCATGGATATGATCCGGGCCCAGGAACAGAAACGAGATCTCCATGATCAATTCCAGCATCAGCTCAAGTGCTCCAATGACAGCTTTTCTGTGATTGCTGACTACTTTGGCAGAGGTGTTTTCAACAAATTGACTCTGCTGACCGACCCTCCCACAGCCAGACTGACCTCCAGCCTGGAGGCTGGGCTGCAACGCGACCTACTCATGCACTCCAGGAGGGGCACTTAA
Amino sequence
MAAYLQWRRFVFFDKELVKEPLSNDGAAPGATPASGSAASKFLCLPPGITVCDSGRGSLVFGDMEGQIWFLPRSYSLQASKPTNYG*HTCTN*SSTIFWHLLEKMKRASTPWLRSGTWRREMVAIHSALESSLLFQEQSQLLYLV*LSMKISTLWPLVSQMAVLH*TKETSPGTGIARPRFCTRATIL*LDWPFAKQERPLTCLL*QQRTSSPI*FLEKTTLAWSWTPMVVACAAQP*VTLLRTCSSLWPGMSVSTCTSLMNVGPASPLRAISSLPTGLEATLSLSPVTGRFLPSQSLPAGIHRAPTSRF*TSMTCATSS*PIAPSLRM*WMCLLSGAPCTC*RGMGGSTHCRRRTHRPNWRCCLRRTYLRWRLTLPRASIWTVMGWPRFSCSMETISTARATTMGLSSNISEPLESWSHPT*SASFWMPSAFTT*LPTCRPCTDNPWPMPTIPPCSSTAIPSSRTARSWRSSSRKRVRVKSTLMWRQPSRSSGRLATTPMPCIWRRTMHIMSGT*RSS*KTLRIIRKPFDTSASCLLSRQRAT*SATARSSCTTYQSRQLSC*RDFVLIIGPASKAAAIGRPQAAGPTLRSSSPSLPITRES*KPS*ST*VKCSQTHPRGSTTHSLSCDCRTGPTRRIHRSKRSFTQRPFPC*RVVASATSLTRPWSCARCTTSRMVSFTFMSRGSCSSRSCTTTCSTSSTGRSSACVSAMGSRTPPCGSRPSATSLARRRTARSMWQLSSSISRTRTSCHLF*WCRPWPTTPQPHSPSSGTTWSKNYRNRASRLHRMSCGCGGTERRPPVSARRSKSSRPVLRFSKRPSAASVTVPWSCPQSTSCVATPSTNTALRVTRKVMLTAPPASLKTGRSWI*SGPRNRNEISMINSSISSSAPMTAFL*LLTTLAEVFSTN*LC*PTLPQPD*PPAWRLGCNATYSCTPGGAL