ENST00000544827.5 REXO2
Information
- Transcript ID
- ENST00000544827.5
- Genome
- hg19
- Position
- chr11:114,310,843-114,320,984
- Strand
- +
- CDS length
- 567
- Amino acid length
- 189
- Gene symbol
- REXO2
- Gene type
- protein-coding
- Gene description
- RNA exonuclease 2
- Gene Entrez Gene ID
- 25996
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 114,310,843 | 114,310,868 |
| 2 | 114,311,378 | 114,311,461 |
| 3 | 114,314,578 | 114,314,655 |
| 4 | 114,315,263 | 114,315,374 |
| 5 | 114,316,701 | 114,316,809 |
| 6 | 114,318,548 | 114,318,601 |
| 7 | 114,320,568 | 114,320,984 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 114,311,378 | 114,311,461 |
| 3 | CDS | 114,314,578 | 114,314,655 |
| 4 | CDS | 114,315,263 | 114,315,374 |
| 5 | CDS | 114,316,701 | 114,316,809 |
| 6 | CDS | 114,318,548 | 114,318,601 |
| 7 | CDS | 114,320,568 | 114,320,697 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 114,440,121 | 114,450,262 | Link |
CDS sequence
ATGACAGGATTGGACATTGAGAAGGACCAGATTATTGAGATGGCCTGTCTGATAACTGACTCTGATCTCAACATTTTGGCTGAAGGTCCTAACCTGATTATAAAACAACCAGATGAGTTGCTGGACAGCATGTCAGATTGGTGTAAGGAGCATCACGGGAAGTCTGGCCTTACCAAGGCAGTGAAGGAGAGTACAATTACATTGCAGCAGGCAGAGTATGAATTTCTGTCCTTTGTACGACAGCAGACTCCTCCAGGGCTCTGTCCACTTGCAGGAAATTCAGTTCATGAAGATAAGAAGTTTCTTGACAAATACATGCCCCAGTTCATGAAACATCTTCATTATAGAATAATTGATGTGAGCACTGTTAAAGAACTGTGCAGACGCTGGTATCCAGAAGAATATGAATTTGCACCAAAGAAGGCTGCTTCTCATAGGGCACTTGATGACATTAGTGAAAGCATCAAAGAGCTTCAGTTTTACCGAAATAACATCTTCAAGAAAAAAATAGATGAAAAGAAGAGGAAAATTATAGAAAATGGGGAAAATGAGAAGACCGTGAGTTGA
Amino sequence
MTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKIDEKKRKIIENGENEKTVS*