ENST00000540540.5 TMPRSS5

Information
Transcript ID
ENST00000540540.5
Genome
hg19
Position
chr11:113,558,272-113,577,065
Strand
-
CDS length
597
Amino acid length
199
Gene symbol
TMPRSS5
Gene type
protein-coding
Gene description
transmembrane serine protease 5
Gene Entrez Gene ID
80975
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 113,558,272 113,558,996
10 113,560,487 113,560,639
9 113,560,953 113,561,095
8 113,561,563 113,561,661
7 113,563,793 113,563,971
6 113,565,200 113,565,362
5 113,566,122 113,566,165
4 113,567,580 113,567,693
3 113,568,005 113,568,140
2 113,569,627 113,569,749
1 113,576,944 113,577,065
CDS
Exon number Type Start Stop
11 CDS 113,558,982 113,558,996
10 CDS 113,560,487 113,560,639
9 CDS 113,560,953 113,561,095
8 CDS 113,561,563 113,561,661
7 CDS 113,563,793 113,563,971
6 CDS 113,565,200 113,565,207
Other genome
Genome Chromosome Start End Links
hg38 chr11 113,687,550 113,706,343 Link
CDS sequence
ATGCACAGTTTCAGGCTGGCCCGCCTGTCCAGCTGGCGGGTTCATGCGGGGCTGGTCAGCCACAGTGCCGTCAGGCCCCACCAAGGGGCTCTGGTGGAGAGGATTATCCCACACCCCCTCTACAGTGCCCAGAATCATGACTACGACGTCGCCCTCCTGAGGCTCCAGACCGCTCTCAACTTCTCAGACACTGTGGGCGCTGTGTGCCTGCCGGCCAAGGAACAGCATTTTCCGAAGGGCTCGCGGTGCTGGGTGTCTGGCTGGGGCCACACCCACCCTAGCCATACTTACAGCTCGGATATGCTCCAGGACACGGTGGTGCCCTTGTTCAGCACTCAGCTCTGCAACAGCTCTTGCGTGTACAGCGGAGCCCTCACCCCCCGCATGCTTTGCGCTGGCTACCTGGACGGAAGGGCTGATGCATGCCAGGGAGATAGCGGGGGCCCCCTAGTGTGCCCAGATGGGGACACATGGCGCCTAGTGGGGGTGGTCAGCTGGGGGCGTGGCTGCGCAGAGCCCAATCACCCAGGTGTCTACGCCAAGGTAGCTGAGTTTCTGGACTGGATCCATGACACTGCTCAGGACTCCCTCCTCTGA
Amino sequence
MHSFRLARLSSWRVHAGLVSHSAVRPHQGALVERIIPHPLYSAQNHDYDVALLRLQTALNFSDTVGAVCLPAKEQHFPKGSRCWVSGWGHTHPSHTYSSDMLQDTVVPLFSTQLCNSSCVYSGALTPRMLCAGYLDGRADACQGDSGGPLVCPDGDTWRLVGVVSWGRGCAEPNHPGVYAKVAEFLDWIHDTAQDSLL*