ENST00000320585.11 CHORDC1
Information
- Transcript ID
- ENST00000320585.11
- Genome
- hg19
- Position
- chr11:89,933,597-89,956,217
- Strand
- -
- CDS length
- 999
- Amino acid length
- 333
- Gene symbol
- CHORDC1
- Gene type
- protein-coding
- Gene description
- cysteine and histidine rich domain containing 1
- Gene Entrez Gene ID
- 26973
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
11 | 89,933,597 | 89,935,719 |
10 | 89,935,981 | 89,936,043 |
9 | 89,936,476 | 89,936,595 |
8 | 89,938,628 | 89,938,733 |
7 | 89,939,370 | 89,939,440 |
6 | 89,943,704 | 89,943,762 |
5 | 89,944,383 | 89,944,486 |
4 | 89,947,186 | 89,947,343 |
3 | 89,948,342 | 89,948,398 |
2 | 89,951,303 | 89,951,352 |
1 | 89,956,059 | 89,956,217 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
11 | CDS | 89,935,573 | 89,935,719 |
10 | CDS | 89,935,981 | 89,936,043 |
9 | CDS | 89,936,476 | 89,936,595 |
8 | CDS | 89,938,628 | 89,938,733 |
7 | CDS | 89,939,370 | 89,939,440 |
6 | CDS | 89,943,704 | 89,943,762 |
5 | CDS | 89,944,383 | 89,944,486 |
4 | CDS | 89,947,186 | 89,947,343 |
3 | CDS | 89,948,342 | 89,948,398 |
2 | CDS | 89,951,303 | 89,951,352 |
1 | CDS | 89,956,059 | 89,956,122 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr11 | 90,200,429 | 90,223,049 | Link |
CDS sequence
ATGGCCTTGCTGTGCTACAACCGGGGCTGCGGTCAGCGCTTCGATCCTGAGACCAATTCCGACGATGCTTGCACATACCACCCAGGTGTTCCGGTCTTTCACGATGCATTAAAGGGTTGGTCTTGCTGTAAGAGAAGAACAACTGATTTTTCTGATTTCTTAAGCATTGTAGGCTGTACAAAAGGTAGACATAATAGTGAGAAGCCACCTGAGCCAGTCAAACCTGAAGTCAAGACTACTGAGAAGAAGGAGCTATGTGAATTAAAACCCAAATTTCAGGAACACATCATTCAAGCCCCTAAGCCAGTAGAAGCAATAAAAAGACCAAGCCCAGATGAACCAATGACAAATTTGGAATTAAAAATATCTGCCTCCCTAAAACAAGCACTTGATAAACTTAAACTGTCATCAGGGAATGAAGAAAATAAGAAAGAAGAAGACAATGATGAAATTAAGATTGGGACCTCATGTAAGAATGGAGGGTGTTCAAAGACATACCAGGGTCTAGAGAGTCTAGAAGAAGTCTGTGTATATCATTCTGGAGTACCTATTTTCCATGAGGGGATGAAATACTGGAGCTGTTGTAGAAGAAAAACTTCTGATTTTAATACATTCTTAGCCCAAGAGGGCTGTACAAAAGGGAAACACATGTGGACTAAAAAAGATGCTGGGAAAAAAGTTGTTCCATGTAGACATGACTGGCATCAGACTGGAGGTGAAGTTACCATTTCAGTATATGCTAAAAACTCACTTCCAGAACTTAGCCGAGTAGAAGCAAATAGCACATTGTTAAATGTGCATATTGTATTTGAAGGAGAGAAGGAATTTGATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAACTATGACTGCAACAAAGATTGAAATCACTATGAGAAAAGCTGAACCGATGCAGTGGGCAAGCCTTGAACTGCCTGCAGCTAAAAAGCAGGAAAAACAAAAAGATGCCACAACAGATTGA
Amino sequence
MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDATTD*