ENST00000393301.5 CTSC

Information
Transcript ID
ENST00000393301.5
Genome
hg19
Position
chr11:88,059,256-88,070,893
Strand
-
CDS length
498
Amino acid length
166
Gene symbol
CTSC
Gene type
protein-coding
Gene description
cathepsin C
Gene Entrez Gene ID
1075
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 88,059,256 88,059,611
4 88,061,097 88,061,184
3 88,061,280 88,061,364
2 88,068,105 88,068,250
1 88,070,669 88,070,893
CDS
Exon number Type Start Stop
5 CDS 88,059,605 88,059,611
4 CDS 88,061,097 88,061,184
3 CDS 88,061,280 88,061,364
2 CDS 88,068,105 88,068,250
1 CDS 88,070,669 88,070,840
Other genome
Genome Chromosome Start End Links
hg38 chr11 88,326,088 88,337,725 Link
CDS sequence
ATGGGTGCTGGGCCCTCCTTGCTGCTCGCCGCCCTCCTGCTGCTTCTCTCCGGCGACGGCGCCGTGCGCTGCGACACACCTGCCAACTGCACCTATCTTGACCTGCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGGACCACAAGAAAAAAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATTTACAACCAAGGCTTTGAGATTGTGTTGAATGACTACAAGTGGTTTGCCTTTTTTAAGGATGTCACTGATTTTATCAGTCATTTGTTCATGCAGCTGGGAACTGTGGGGATATATGATTTGCCACATCTGAGGAACAAACTGGAGGGTGACTGGAGAGATTATGGTTTTCTTATGAATTTCTTGCTTGAGCCTGCTTGTCTGCTGTTTCTAAGTTGTCTGCACTATTTTATTTATTAA
Amino sequence
MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFKDVTDFISHLFMQLGTVGIYDLPHLRNKLEGDWRDYGFLMNFLLEPACLLFLSCLHYFIY*