ENST00000316398.5 CCDC89
Information
- Transcript ID
- ENST00000316398.5
- Genome
- hg19
- Position
- chr11:85,394,891-85,397,238
- Strand
- -
- CDS length
- 1,125
- Amino acid length
- 375
- Gene symbol
- CCDC89
- Gene type
- protein-coding
- Gene description
- coiled-coil domain containing 89
- Gene Entrez Gene ID
- 220388
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 85,394,891 | 85,397,238 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 85,396,049 | 85,397,173 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 85,683,848 | 85,686,195 | Link |
CDS sequence
ATGAGAGCGCCTATGCTCCAGAAACAGCAGGCTCCCAGGATGGACACCCCGCCCCCTGAAGAACGCTTAGAGAAGCAAAATGAAAAACTGAACAACCAGGAAGAGGAGACGGAGTTTAAGGAACTGGACGGTCTGAGGGAAGCCTTGGCAAACCTCCGGGGACTGTCAGAGGAGGAGAGGAGCGAGAAGGCTATGCTTCGCTCCCGCATTGAAGAGCAGTCCCAGCTCATCTGCATCCTGAAGCGGAGGTCAGATGAGGCCCTGGAGCGCTGCCAGATCCTAGAGCTGCTCAATGCAGAGCTGGAGGAGAAGATGATGCAGGAGGCTGAGAAGCTCAAGGCCCAGGGTGAGTACAGTCGGAAACTAGAGGAACGCTTTATGACCCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAGTGAGAACATCAAGCTGAGGGAGGAGAATGAGAAGCTGAGGCTGGAGAATAGCAGCCTCTTCAGCCAGGCTCTGAAGGATGAGGAGGCGAAAGTATTACAGCTCACAGTCCGGTGTGAGGCCCTCACTGGGGAGCTAGAAACGCTGAAGGAGAGGTGTGCTCAGGATGCCTGCCAGGCACAGGCGCGCGAGAAGGAGCTGCTGGAGCTACAGAGCCAGCAGGCCTGCACCCACACCAAGGAGACAGAACAGCTGCGCAGCCAGCTGCAGACCCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCAGATAGCTAAGGCAGAGGAGACACACAGCAGCCTGAGCCAGGAGCTGCAGGCCAGGCTGCAGACCGTCACTAGAGAGAAAGAGGAGTTGCTGCAGCTGTCCATTGAAAGGGGCAAAGTGCTTCAGAACAAACAGGCAGAGATCTGCCAGCTTGAGGAAAAGTTGGAGATAGCAAATGAAGACAGGAAGCATGCGCTGGAGCGGTTTGAGCAAGAGGCAGTGGCTGTGGACAGCAACTTGAGAGTCAGGGAGCTTCAGCGCAAAGTAGATGGGATCCAGAAGGCCTACGATGAACTCAGGCTGCAGTCTGAAGCCTTCAAAAAGCACAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTCTCCATAG
Amino sequence
MRAPMLQKQQAPRMDTPPPEERLEKQNEKLNNQEEETEFKELDGLREALANLRGLSEEERSEKAMLRSRIEEQSQLICILKRRSDEALERCQILELLNAELEEKMMQEAEKLKAQGEYSRKLEERFMTLAANHELMLRFKDEYKSENIKLREENEKLRLENSSLFSQALKDEEAKVLQLTVRCEALTGELETLKERCAQDACQAQAREKELLELQSQQACTHTKETEQLRSQLQTLKQQHQQAVEQIAKAEETHSSLSQELQARLQTVTREKEELLQLSIERGKVLQNKQAEICQLEEKLEIANEDRKHALERFEQEAVAVDSNLRVRELQRKVDGIQKAYDELRLQSEAFKKHSLDLLSKERELNGKLRHLSP*