ENST00000525064.5 CLNS1A
Information
- Transcript ID
- ENST00000525064.5
- Genome
- hg19
- Position
- chr11:77,327,240-77,348,817
- Strand
- -
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- CLNS1A
- Gene type
- protein-coding
- Gene description
- chloride nucleotide-sensitive channel 1A
- Gene Entrez Gene ID
- 1207
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 77,327,240 | 77,327,740 |
| 5 | 77,330,651 | 77,330,740 |
| 4 | 77,336,008 | 77,336,115 |
| 3 | 77,336,762 | 77,336,863 |
| 2 | 77,340,808 | 77,340,944 |
| 1 | 77,348,635 | 77,348,817 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 77,330,673 | 77,330,740 |
| 4 | CDS | 77,336,008 | 77,336,115 |
| 3 | CDS | 77,336,762 | 77,336,863 |
| 2 | CDS | 77,340,808 | 77,340,944 |
| 1 | CDS | 77,348,635 | 77,348,759 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 77,616,195 | 77,637,772 | Link |
CDS sequence
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGATTCTCACTGGAATACCCCACCATTAGTTTACATGCATTATCCAGGGACCGAAGTGACTGTCTAGGAGAGCATTTGTATGTTATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATGTTGAACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGGCCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGATGGGATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA
Amino sequence
MSFLKSFPPPGPAEGLLRQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGSGLGFSLEYPTISLHALSRDRSDCLGEHLYVMVNAKFEEESKEPVADEEEEDSDDDVEPITEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYDGEEYDVEAHDGMEVDTTPTVAGQFEDADVDH*