ENST00000544909.5 PAAF1

Information
Transcript ID
ENST00000544909.5
Genome
hg19
Position
chr11:73,599,839-73,638,770
Strand
+
CDS length
1,182
Amino acid length
394
Gene symbol
PAAF1
Gene type
protein-coding
Gene description
proteasomal ATPase associated factor 1
Gene Entrez Gene ID
80227
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 73,599,839 73,600,290
2 73,602,157 73,602,246
3 73,610,191 73,610,289
4 73,611,315 73,611,465
5 73,620,444 73,620,638
6 73,625,458 73,625,549
7 73,627,590 73,627,705
8 73,629,995 73,630,077
9 73,635,660 73,635,742
10 73,638,330 73,638,770
CDS
Exon number Type Start Stop
1 CDS 73,600,096 73,600,290
2 CDS 73,602,157 73,602,246
3 CDS 73,610,191 73,610,289
4 CDS 73,611,315 73,611,465
5 CDS 73,620,444 73,620,638
6 CDS 73,625,458 73,625,549
7 CDS 73,627,590 73,627,705
8 CDS 73,629,995 73,630,077
9 CDS 73,635,660 73,635,742
10 CDS 73,638,330 73,638,407
Other genome
Genome Chromosome Start End Links
hg38 chr11 73,888,794 73,927,725 Link
CDS sequence
ATGCTGGAATTGAAACCCAGTTCTGTTGATTCCAAGTTTAGCACTACCATGCAAGCCTACGTTTTTCCCAGGTGTTTTGGCACAGCCTGGGTGCTGACTTCTTTCTTCCCTTCATACTCAGACCTGGATACAGTCTTTATCACTTCAAACATGATTGCTAATTTTTGCTGTGAACCTGCTGAGTGGGTTCAGACAAAAAGCATTCATATTTCATGTCCAAAGGAAAATGCATCTTCTAAGTTTTTGGCACCATATACTACTTTTTCCAGAATTCATACAAAGAGTATAACATGCCTGGACATTTCCAGCAGAGGAGGTCTTGGTGTGTCTTCTAGTACTGACGGGACCATGAAAATCTGGCAGGCTTCCAATGGAGAACTCAGGAGAGTATTGGAAGGACATGTGTTTGATGTGAATTGTTGCAGGTTTTTCCCATCAGGCCTTGTGGTCCTGAGTGGGGGAATGGATGCCCAGCTGAAGATATGGTCAGCTGAAGATGCTAGCTGCGTGGTGACCTTCAAAGGTCACAAAGGAGGTATCCTGGATACAGCCATCGTTGATCGGGGGAGGAATGTGGTGTCTGCTTCTCGAGATGGGACAGCACGACTTTGGGATTGTGGGCGCTCAGCCTGCTTGGGAGTCCTTGCAGATTGTGGTTCTTCTATCAATGGAGTGGCGGTGGGTGCTGCTGACAACTCCATAAACCTTGGCTCCCCTGAGCAGATGCCCAGTGAACGGGAGGTTGGAACAGAGGCCAAAATGCTGCTCTTGGCCCGGGAAGATAAGAAACTTCAGTGCTTGGGACTACAGAGCAGGCAGCTGGTGTTCCTCTTTATTGGCTCAGACGCTTTCAACTGCTGTACTTTTCTCTCTGGCTTCTTGCTATTGGCTGGGACTCAAGATGGAAACATTTATCAGCTGGATGTGAGGAGTCCAAGGGCTCCGGTACAAGTCATCCACAGATCAGGAGCACCAGTTCTATCCCTGCTAAGTGTCAGAGATGGATTCATTGCTAGCCAAGGTGATGGAAGCTGTTTTATTGTCCAGCAAGACTTAGACTATGTCACTGAGCTCACTGGGGCTGACTGTGACCCTGTGTACAAGGTAGCCACATGGGAGAAGCAGATCTACACATGCTGTCGAGACGGTCTTGTACGACGCTACCAGCTTTCTGACCTCTGA
Amino sequence
MLELKPSSVDSKFSTTMQAYVFPRCFGTAWVLTSFFPSYSDLDTVFITSNMIANFCCEPAEWVQTKSIHISCPKENASSKFLAPYTTFSRIHTKSITCLDISSRGGLGVSSSTDGTMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVDRGRNVVSASRDGTARLWDCGRSACLGVLADCGSSINGVAVGAADNSINLGSPEQMPSEREVGTEAKMLLLAREDKKLQCLGLQSRQLVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRSPRAPVQVIHRSGAPVLSLLSVRDGFIASQGDGSCFIVQQDLDYVTELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL*