ENST00000636477.1 CABP2
Information
- Transcript ID
- ENST00000636477.1
- Genome
- hg19
- Position
- chr11:67,286,425-67,291,988
- Strand
- -
- CDS length
- 615
- Amino acid length
- 205
- Gene symbol
- CABP2
- Gene type
- protein-coding
- Gene description
- calcium binding protein 2
- Gene Entrez Gene ID
- 51475
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
6 | 67,286,425 | 67,286,635 |
5 | 67,287,264 | 67,287,411 |
4 | 67,287,522 | 67,287,631 |
3 | 67,288,496 | 67,288,630 |
2 | 67,289,423 | 67,289,453 |
1 | 67,291,683 | 67,291,988 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
6 | CDS | 67,286,610 | 67,286,635 |
5 | CDS | 67,287,264 | 67,287,411 |
4 | CDS | 67,287,522 | 67,287,631 |
3 | CDS | 67,288,496 | 67,288,630 |
2 | CDS | 67,289,423 | 67,289,453 |
1 | CDS | 67,291,683 | 67,291,847 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr11 | 67,518,954 | 67,524,517 | Link |
CDS sequence
ATGGCCCAGCCCCAGGGCCCAGCAGAGGGCAGCCTCCCAACGGGGGACCCCAGCCCCTCTGAGGGCACTCCAGGAACCAGCCAGGCCCCTGGCAGCCCAGCAGCCACCCGGCGACGAGAGCTTCTCCGGGAGCTCGAGGCCCAGGTGCAGGCAGCCTACGGGCAGGACCGGGAGCTGCGGCCCGAGGAGATTGAAGAGCTGCAGGTCGCCTTCCAGGAGTTTGACCGAGACCGGGACGGCTACATTGGCTGCCGGGAGCTGGGTGCCTGCATGCGGACCCTGGGCTACATGCCCACCGAGATGGAGCTCATCGAGATCTCACAACAAATCAGTGGCGGAAAGGTGGACTTTGAAGACTTCGTGGAGCTGATGGGCCCCAAGCTGCTGGCAGAGACGGCAGACATGATCGGTGTCCGGGAGCTACGGGACGCCTTCCGGGAGTTCGACACCAATGGGGACGGCCGCATCAGCGTGGGCGAGCTCCGGGCGGCCCTCAAGGCCCTGCTGGGGGAGCGCCTCAGCCAGCGGGAGGTGGACGAGATCCTCCAGGACGTGGACCTCAATGGGGACGGTCTGGTCGACTTCGAAGAGTTTGTGCGAATGATGTCTCGGTGA
Amino sequence
MAQPQGPAEGSLPTGDPSPSEGTPGTSQAPGSPAATRRRELLRELEAQVQAAYGQDRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMSR*