ENST00000311034.7 NPAS4
Information
- Transcript ID
- ENST00000311034.7
- Genome
- hg19
- Position
- chr11:66,188,506-66,194,178
- Strand
- +
- CDS length
- 2,409
- Amino acid length
- 803
- Gene symbol
- NPAS4
- Gene type
- protein-coding
- Gene description
- neuronal PAS domain protein 4
- Gene Entrez Gene ID
- 266743
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 66,188,506 | 66,188,825 |
| 2 | 66,189,591 | 66,189,742 |
| 3 | 66,189,922 | 66,190,024 |
| 4 | 66,190,145 | 66,190,412 |
| 5 | 66,190,594 | 66,190,703 |
| 6 | 66,191,049 | 66,191,184 |
| 7 | 66,191,306 | 66,192,741 |
| 8 | 66,193,432 | 66,194,178 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 66,188,651 | 66,188,825 |
| 2 | CDS | 66,189,591 | 66,189,742 |
| 3 | CDS | 66,189,922 | 66,190,024 |
| 4 | CDS | 66,190,145 | 66,190,412 |
| 5 | CDS | 66,190,594 | 66,190,703 |
| 6 | CDS | 66,191,049 | 66,191,184 |
| 7 | CDS | 66,191,306 | 66,192,741 |
| 8 | CDS | 66,193,432 | 66,193,460 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 66,421,035 | 66,426,707 | Link |
CDS sequence
ATGTACCGCTCCACCAAGGGCGCCTCCAAGGCGCGCCGGGACCAGATCAACGCCGAGATCCGGAACCTCAAGGAGCTGCTGCCGCTGGCCGAAGCGGACAAGGTCCGGCTGTCCTACCTGCACATCATGAGCCTCGCCTGCATCTACACTCGCAAGGGCGTCTTCTTCGCTGGTGGCACTCCTCTGGCGGGCCCCACGGGGCTTCTCTCAGCTCAAGAGCTTGAGGACATCGTAGCGGCACTACCCGGCTTTCTGCTTGTGTTCACAGCCGAGGGGAAATTGCTCTACCTGTCTGAGAGTGTGAGCGAGCATCTGGGCCACTCCATGGTGGACCTGGTTGCCCAGGGTGACAGCATCTACGACATCATTGACCCAGCTGACCACCTCACTGTGCGCCAGCAACTCACCCTGCCCTCTGCCCTGGACACTGATCGCCTCTTCCGCTGCCGCTTCAACACCTCCAAGTCCCTCAGGCGCCAGAGTGCAGGCAACAAACTCGTGCTTATTCGAGGCCGATTCCATGCTCACCCACCTGGAGCCTACTGGGCAGGAAATCCCGTGTTCACAGCTTTCTGTGCCCCTCTGGAGCCGAGACCCCGCCCAGGTCCTGGCCCTGGCCCTGGCCCTGCCTCGCTCTTCCTGGCCATGTTCCAGAGCCGCCATGCTAAAGACCTGGCTCTACTGGACATCTCCGAGAGTGTCCTAATCTACCTGGGCTTTGAGCGCAGTGAACTGCTTTGTAAATCATGGTATGGACTGCTGCACCCCGAGGACCTGGCCCACGCTTCTGCTCAACACTACCGCCTGTTGGCTGAGAGTGGAGATATTCAGGCAGAGATGGTGGTGAGGCTACAGGCCAAGACTGGAGGCTGGGCATGGATTTACTGCCTGTTATACTCAGAAGGTCCAGAGGGACCCATTACTGCCAATAACTACCCAATCAGTGACATGGAAGCCTGGAGCCTCCGCCAGCAGTTGAACTCTGAAGACACCCAGGCAGCTTATGTCCTGGGCACTCCGACCATGCTGCCCTCATTCCCTGAAAACATTCTTTCCCAGGAAGAGTGCTCCAGCACTAACCCACTCTTCACCGCAGCACTGGGGGCTCCCAGAAGCACCAGCTTCCCCAGTGCTCCTGAACTGAGTGTTGTCTCTGCATCAGAAGAGCTTCCCCGACCCTCCAAAGAACTGGACTTCAGTTACCTGACATTCCCTTCTGGGCCTGAGCCTTCTCTCCAAGCAGAACTAAGCAAGGATCTTGTGTGCACTCCACCTTACACGCCCCATCAGCCAGGAGGCTGTGCCTTCCTCTTCAGCCTCCATGAGCCCTTCCAGACCCATTTGCCCACCCCATCCAGCACTCTTCAAGAACAGCTGACTCCAAGCACTGCGACCTTCTCTGATCAGTTGACGCCCAGCAGTGCAACCTTCCCAGATCCACTAACTAGCCCACTGCAAGGCCAGTTGACTGAAACCTCGGTCAGAAGCTATGAAGACCAGTTGACTCCCTGCACCTCCACCTTCCCAGACCAGCTGCTTCCCAGCACAGCCACCTTCCCAGAGCCTCTGGGCAGCCCTGCCCATGAACAGCTGACTCCTCCCAGCACAGCATTCCAAGCACACCTGGACAGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCCAACCCTACCAAGACTTACTTTGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGTCCTAGCAGCCCTGGTAATGGGGACTGCACGCTCTTGGCCCTAGCCCAGCTCCGGGGCCCCCTCTCTGTGGATGTCCCCCTGGTGCCCGAAGGCCTGCTCACACCTGAGGCCTCTCCAGTCAAGCAGAGTTTCTTCCACTACTCTGAAAAGGAGCAGAATGAGATAGACCGTCTCATCCAGCAGATTAGCCAATTGGCTCAGGGCATGGACAGACCCTTCTCAGCTGAGGCTGGCACTGGCGGACTAGAGCCACTTGGAGGACTGGAGCCCCTGGACTCCAACCTGTCCCTGTCAGGGGCAGGCCCCCCTGTGCTCAGCCTGGACCTGAAACCCTGGAAATGCCAGGAGCTGGACTTCCTGGCTGACCCTGATAACATGTTCCTGGAAGAGACGCCCGTGGAAGACATCTTCATGGATCTCTCTACCCCAGATCCCAGTGAGGAATGGGGCTCAGGGGATCCTGAGGCAGAGGGCCCAGGAGGGGCCCCATCGCCTTGCAACAACCTGTCCCCAGAAGACCACAGCTTCCTGGAGGACCTGGCCACATATGAAACCGCCTTTGAGACAGGTGTCTCAGCATTCCCCTATGATGGGTTTACTGATGAGTTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTCCATGAAGATGGAAGTGGAGGGGAACCAACGTTTTGA
Amino sequence
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTLPSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLEPRPRPGPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQAKTGGWAWIYCLLYSEGPEGPITANNYPISDMEAWSLRQQLNSEDTQAAYVLGTPTMLPSFPENILSQEECSSTNPLFTAALGAPRSTSFPSAPELSVVSASEELPRPSKELDFSYLTFPSGPEPSLQAELSKDLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPTPSSTLQEQLTPSTATFSDQLTPSSATFPDPLTSPLQGQLTETSVRSYEDQLTPCTSTFPDQLLPSTATFPEPLGSPAHEQLTPPSTAFQAHLDSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTGGLEPLGGLEPLDSNLSLSGAGPPVLSLDLKPWKCQELDFLADPDNMFLEETPVEDIFMDLSTPDPSEEWGSGDPEAEGPGGAPSPCNNLSPEDHSFLEDLATYETAFETGVSAFPYDGFTDELHQLQSQVQDSFHEDGSGGEPTF*