ENST00000307886.8 CTSW

Information
Transcript ID
ENST00000307886.8
Genome
hg19
Position
chr11:65,647,308-65,651,212
Strand
+
CDS length
1,131
Amino acid length
377
Gene symbol
CTSW
Gene type
protein-coding
Gene description
cathepsin W
Gene Entrez Gene ID
1521
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 65,647,308 65,647,412
2 65,647,673 65,647,757
3 65,648,878 65,648,991
4 65,649,646 65,649,800
5 65,649,901 65,649,997
6 65,650,080 65,650,160
7 65,650,250 65,650,375
8 65,650,540 65,650,604
9 65,650,686 65,650,895
10 65,650,979 65,651,212
CDS
Exon number Type Start Stop
1 CDS 65,647,326 65,647,412
2 CDS 65,647,673 65,647,757
3 CDS 65,648,878 65,648,991
4 CDS 65,649,646 65,649,800
5 CDS 65,649,901 65,649,997
6 CDS 65,650,080 65,650,160
7 CDS 65,650,250 65,650,375
8 CDS 65,650,540 65,650,604
9 CDS 65,650,686 65,650,895
10 CDS 65,650,979 65,651,089
Other genome
Genome Chromosome Start End Links
hg38 chr11 65,879,837 65,883,741 Link
CDS sequence
ATGGCACTGACTGCCCACCCCTCCTGCCTCCTGGCCCTGTTGGTGGCAGGCCTAGCCCAAGGCATCAGAGGCCCCCTTAGGGCCCAGGACCTAGGTCCCCAGCCGCTAGAGCTGAAAGAGGCCTTCAAGTTGTTCCAGATCCAGTTCAACCGGAGTTACCTGAGCCCAGAAGAGCATGCTCACCGCCTGGACATCTTTGCCCACAACCTGGCCCAGGCTCAGAGGCTGCAGGAGGAGGACTTGGGCACAGCTGAGTTTGGGGTGACTCCATTCAGTGACCTCACAGAGGAGGAGTTTGGCCAGCTCTATGGCTATCGGAGGGCAGCTGGAGGGGTCCCCAGCATGGGCAGAGAAATAAGGTCTGAAGAGCCAGAGGAGTCAGTACCTTTCAGCTGTGACTGGCGGAAGGTGGCCAGCGCCATCTCACCCATCAAGGACCAGAAAAACTGCAACTGCTGCTGGGCCATGGCAGCGGCAGGCAACATAGAGACCCTGTGGCGCATCAGTTTCTGGGATTTTGTGGATGTCTCCGTGCAGGAACTGCTGGACTGTGGCCGCTGTGGGGATGGCTGCCACGGTGGCTTCGTCTGGGACGCGTTCATAACTGTCCTCAACAACAGCGGCCTGGCCAGTGAAAAGGACTACCCGTTCCAGGGCAAAGTCAGAGCCCACAGGTGCCACCCCAAGAAGTACCAGAAGGTGGCCTGGATCCAGGACTTCATCATGCTGCAGAACAACGAGCACAGAATTGCGCAGTACCTGGCCACTTATGGCCCCATCACCGTGACCATCAACATGAAGCCCCTTCAGCTATACCGGAAAGGTGTGATCAAGGCCACACCCACCACCTGTGACCCCCAGCTTGTGGACCACTCTGTCCTGCTGGTGGGTTTTGGCAGCGTCAAGTCAGAGGAGGGGATATGGGCAGAGACAGTCTCATCGCAGTCTCAGCCTCAGCCTCCACACCCCACCCCATACTGGATCCTGAAGAACTCCTGGGGGGCCCAATGGGGAGAGAAGGGCTATTTCCGGCTGCACCGAGGGAGCAATACCTGTGGCATCACCAAGTTCCCGCTCACTGCCCGTGTGCAGAAACCGGATATGAAGCCCCGAGTCTCCTGCCCTCCCTGA
Amino sequence
MALTAHPSCLLALLVAGLAQGIRGPLRAQDLGPQPLELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYGYRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP*