ENST00000377244.8 SNX15
Information
- Transcript ID
- ENST00000377244.8
- Genome
- hg19
- Position
- chr11:64,794,911-64,808,044
- Strand
- +
- CDS length
- 1,029
- Amino acid length
- 343
- Gene symbol
- SNX15
- Gene type
- protein-coding
- Gene description
- sorting nexin 15
- Gene Entrez Gene ID
- 29907
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 64,794,911 | 64,795,108 |
2 | 64,799,640 | 64,799,675 |
3 | 64,799,903 | 64,800,023 |
4 | 64,802,319 | 64,802,434 |
5 | 64,802,531 | 64,802,678 |
6 | 64,802,992 | 64,803,135 |
7 | 64,806,044 | 64,806,301 |
8 | 64,807,158 | 64,808,044 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 64,795,010 | 64,795,108 |
2 | CDS | 64,799,640 | 64,799,675 |
3 | CDS | 64,799,903 | 64,800,023 |
4 | CDS | 64,802,319 | 64,802,434 |
5 | CDS | 64,802,531 | 64,802,678 |
6 | CDS | 64,802,992 | 64,803,135 |
7 | CDS | 64,806,044 | 64,806,301 |
8 | CDS | 64,807,158 | 64,807,264 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr11 | 65,027,439 | 65,040,572 | Link |
CDS sequence
ATGTCCCGCCAGGCGAAGGATGACTTCCTGCGGCACTACACAGTGTCGGACCCCAGGACTCACCCCAAGGGCTACACCGAGTACAAAGTAACCGCGCAGTTCATCTCAAAGAAGGACCCAGAGGATGTCAAAGAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGAGACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCTGCTTTCCCCCGGGCCCAGGTGTTTGGCCGGTTTGAAGCCTCAGTGATCGAGGAGCGGCGAAAGGGGGCAGAGGACCTGCTTCGCTTCACTGTGCACATACCTGCGCTCAACAACAGCCCCCAGCTCAAGGAGTTCTTCCGGGGTGGGGAGGTGACCCGACCCTTGGAGGTGTCCAGGGACCTACACATCCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGGCTATCCCAACTGCTCCCTGCAGAAAGGAGGGGCCTCGAGGAATTGGAGGTGCCAGTGGACCCCCCACCATCCAGCCCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTGTGAGAGCACCGAGGAGGCATCTGGTTCCCCTGCCCGAGGCCCCCTCACCGAGGCTGAGCTTGCCCTCTTCGACCCCTTCTCCAAGGAAGAAGGCGCAGCCCCCAGCCCCACCCATGTGGCTGAGCTGGCAACGATGGAGGTGGAGTCTGCAAGGCTGGACCAGGAACCCTGGGAGCCAGGAGGGCAGGAGGAGGAAGAGGATGGGGAAGGAGGGCCCACCCCTGCCTACCTAAGCCAGGCCACAGAGCTCATCACCCAGGCCCTGCGGGATGAGAAGGCAGGCGCTTACGCTGCTGCACTCCAGGGCTATCGAGACGGCGTGCACGTCTTGCTTCAGGGAGTCCCCAGTGACCCGTTGCCTGCCCGCCAGGAAGGTGTGAAGAAGAAGGCAGCTGAGTACCTGAAGCGGGCAGAGGAGATCCTGCGCCTGCACCTGTCTCAACTCCCACCCTAA
Amino sequence
MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEEGAAPSPTHVAELATMEVESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALRDEKAGAYAAALQGYRDGVHVLLQGVPSDPLPARQEGVKKKAAEYLKRAEEILRLHLSQLPP*