ENST00000340246.10 LGALS12
Information
- Transcript ID
- ENST00000340246.10
- Genome
- hg19
- Position
- chr11:63,273,835-63,284,246
- Strand
- +
- CDS length
- 948
- Amino acid length
- 316
- Gene symbol
- LGALS12
- Gene type
- protein-coding
- Gene description
- galectin 12
- Gene Entrez Gene ID
- 85329
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 63,273,835 | 63,273,999 |
| 2 | 63,276,025 | 63,276,113 |
| 3 | 63,276,247 | 63,276,463 |
| 4 | 63,277,250 | 63,277,369 |
| 5 | 63,277,935 | 63,277,973 |
| 6 | 63,278,551 | 63,278,577 |
| 7 | 63,279,224 | 63,279,312 |
| 8 | 63,283,035 | 63,283,185 |
| 9 | 63,283,719 | 63,284,246 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 63,273,931 | 63,273,999 |
| 2 | CDS | 63,276,025 | 63,276,113 |
| 3 | CDS | 63,276,247 | 63,276,463 |
| 4 | CDS | 63,277,250 | 63,277,369 |
| 5 | CDS | 63,277,935 | 63,277,973 |
| 6 | CDS | 63,278,551 | 63,278,577 |
| 7 | CDS | 63,279,224 | 63,279,312 |
| 8 | CDS | 63,283,035 | 63,283,185 |
| 9 | CDS | 63,283,719 | 63,283,865 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 63,506,363 | 63,516,774 | Link |
CDS sequence
ATGTCACCTGGAGAAAAACTGGACCCAATTCCTGACAGCTTCATTCTGCAACCACCAGTCTTCCACCCGGTGGTTCCTTATGTCACGACGATTTTTGGAGGCCTGCATGCAGGCAAGATGGTCATGCTGCAAGGAGTGGTCCCTCTAGATGCACACAGTAGGTTTCAGGTGGACTTCCAGTGTGGCTGCAGCCTGTGTCCCCGGCCAGATATCGCCTTCCACTTCAACCCTCGCTTCCATACCACCAAGCCCCATGTCATCTGCAACACCCTGCATGGTGGACGCTGGCAAAGGGAGGCCCGGTGGCCCCACCTGGCCCTGCGAAGAGGCTCCAGCTTCCTCATCCTCTTTCTCTTCGGGAATGAGGAAGTGAAGGTGAGTGTGAATGGACAGCACTTTCTCCACTTCCGCTACCGGCTCCCACTGTCTCATGTGGACACGCTGGGTATATTTGGTGACATCCTGGTAGAGGCTGTTGGATTCCTGAACATCAATCCATTTGTGGAGGGCAGCAGAGAGTACCCAGCTGGACATCCTTTCCTGCTGATGAGCCCCAGGCTGGAGGTGCCCTGCTCACATGCTCTTCCCCAGGGTCTCTCGCCTGGGCAGGTCATCATAGTACGGGGACTGGTCTTGCAAGAGCCGAAGCATTTTACTGTGAGCCTGAGGGACCAGGCTGCCCATGCTCCTGTGACACTCAGGGCCTCCTTCGCAGACAGAACTCTGGCCTGGATCTCCCGCTGGGGGCAGAAGAAACTGATCTCAGCCCCCTTCCTCTTTTACCCCCAGAGATTCTTTGAGGTGCTGCTCCTGTTCCAGGAGGGAGGGCTGAAGCTGGCGCTCAATGGGCAGGGGCTGGGGGCCACCAGCATGAACCAGCAGGCCCTGGAGCAGCTGCGGGAGCTCCGGATCAGTGGAAGTGTCCAGCTCTACTGTGTCCACTCCTGA
Amino sequence
MSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQGVVPLDAHSRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGFLNINPFVEGSREYPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLRDQAAHAPVTLRASFADRTLAWISRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS*