ENST00000532297.5 NXF1
Information
- Transcript ID
- ENST00000532297.5
- Genome
- hg19
- Position
- chr11:62,559,643-62,573,774
- Strand
- -
- CDS length
- 1,860
- Amino acid length
- 620
- Gene symbol
- NXF1
- Gene type
- protein-coding
- Gene description
- nuclear RNA export factor 1
- Gene Entrez Gene ID
- 10482
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 22 | 62,559,643 | 62,559,986 |
| 21 | 62,560,113 | 62,560,173 |
| 20 | 62,561,730 | 62,561,912 |
| 19 | 62,562,407 | 62,562,479 |
| 18 | 62,563,373 | 62,563,415 |
| 17 | 62,563,538 | 62,563,653 |
| 16 | 62,563,759 | 62,563,817 |
| 15 | 62,563,932 | 62,564,039 |
| 14 | 62,564,655 | 62,564,710 |
| 13 | 62,564,790 | 62,564,858 |
| 12 | 62,566,011 | 62,566,047 |
| 11 | 62,567,849 | 62,567,958 |
| 10 | 62,568,566 | 62,568,673 |
| 9 | 62,568,801 | 62,568,889 |
| 8 | 62,569,034 | 62,569,103 |
| 7 | 62,569,211 | 62,569,291 |
| 6 | 62,569,414 | 62,569,518 |
| 5 | 62,569,649 | 62,569,732 |
| 4 | 62,570,891 | 62,571,044 |
| 3 | 62,571,264 | 62,571,450 |
| 2 | 62,572,801 | 62,573,346 |
| 1 | 62,573,663 | 62,573,774 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 22 | CDS | 62,559,948 | 62,559,986 |
| 21 | CDS | 62,560,113 | 62,560,173 |
| 20 | CDS | 62,561,730 | 62,561,912 |
| 19 | CDS | 62,562,407 | 62,562,479 |
| 18 | CDS | 62,563,373 | 62,563,415 |
| 17 | CDS | 62,563,538 | 62,563,653 |
| 16 | CDS | 62,563,759 | 62,563,817 |
| 15 | CDS | 62,563,932 | 62,564,039 |
| 14 | CDS | 62,564,655 | 62,564,710 |
| 13 | CDS | 62,564,790 | 62,564,858 |
| 12 | CDS | 62,566,011 | 62,566,047 |
| 11 | CDS | 62,567,849 | 62,567,958 |
| 10 | CDS | 62,568,566 | 62,568,673 |
| 9 | CDS | 62,568,801 | 62,568,889 |
| 8 | CDS | 62,569,034 | 62,569,103 |
| 7 | CDS | 62,569,211 | 62,569,291 |
| 6 | CDS | 62,569,414 | 62,569,518 |
| 5 | CDS | 62,569,649 | 62,569,732 |
| 4 | CDS | 62,570,891 | 62,571,044 |
| 3 | CDS | 62,571,264 | 62,571,450 |
| 2 | CDS | 62,572,801 | 62,572,828 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 62,792,171 | 62,806,302 | Link |
CDS sequence
ATGGCGGACGAGGGGAAGTCGTACAGCGAACACGATGATGAACGCGTTAATTTCCCTCAAAGAAAGAAGAAAGGCCGGGGTCCCTTCCGGTGGAAATATGGTGAAGGAAACCGTAGGTCTGGAAGAGGCGGTTCTGGTATTCGGTCTTCCCGCCTTGAGGAAGATGATGGAGATGTGGCAATGAGTGATGCCCAGGATGGTCCCCGAGTACGATACAACCCCTATACCACCCGACCTAACCGTCGGGGTGATACTTGGCATGATCGAGATCGCATTCATGTTACTGTGCGGAGAGACAGAGCTCCTCCAGAGAGAGGAGGGGCTGGCACCAGCCAGGATGGGACCTCAAAGAACTGGTTCAAGATTACAATTCCTTATGGCAGAAAGTATGACAAGGCATGGCTCCTGAGCATGATTCAGAGCAAGTGCAGTGTGCCCTTCACCCCTATTGAGTTTCACTATGAGAATACACGGGCCCAGTTCTTCGTTGAAGACGCCAGTACTGCCTCTGCATTGAAGGCTGTCAACTATAAGATTTTGGATCGGGAGAACCGAAGGATATCTATCATCATCAACTCTTCTGCTCCACCCCACACTATACTGAATGAACTGAAGCCAGAACAAGTAGAACAGCTAAAGCTGATCATGAGCAAACGATACGATGGCTCCCAACAAGCCCTTGACCTCAAAGGCCTCCGTTCAGACCCAGATTTGGTGGCCCAGAACATTGACGTTGTCCTGAATCGCAGAAGCTGTATGGCAGCTACCCTGAGGATCATTGAAGAGAACATCCCTGAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTGGATGACATGTCTAGCATTGTTCAGAAGGCACCCAACCTGAAGATCCTAAACCTTTCTGGAAATGAATTGAAGTCTGAGCGGGAATTGGACAAGATAAAGGGGCTGAAGCTAGAAGAGCTCTGGCTCGATGGAAACTCCCTGTGTGACACCTTCCGAGACCAGTCCACCTACATCAGCGCCATTCGCGAACGATTTCCCAAGTTACTACGCCTGGATGGCCATGAGCTACCCCCACCAATTGCCTTTGATGTTGAAGCCCCCACGACGTTACCGCCCTGCAAGGGAAGCTATTTTGGAACAGAAAACTTGAAGAGTCTGGTCTTGCACTTCCTGCAACAGTACTATGCAATTTACGACTCTGGAGACCGACAAGGGCTCCTGGATGCCTACCATGATGGGGCCTGCTGTTCCCTGAGCATTCCTTTCATTCCTCAGAACCCTGCCCGAAGCAGCTTAGCCGAGTATTTCAAGGATAGCAGAAATGTGAAGAAGCTTAAAGACCCTACCTTGCGGTTCCGGCTGCTGAAGCACACGCGTCTCAACGTTGTTGCCTTCCTCAATGAGTTGCCCAAAACCCAGCACGACGTCAATTCCTTCGTGGTAGACATAAGCGCCCAGACAAGCACATTGCTGTGTTTTTCTGTCAATGGAGTCTTCAAGGAAGTGGACGGAAAGTCCCGGGATTCTTTGCGAGCCTTCACCCGGACATTCATTGCTGTTCCTGCTAGCAATTCAGGGCTATGTATTGTAAATGATGAGCTATTTGTGCGGAATGCCAGTTCTGAAGAGATCCAAAGAGCCTTCGCTATGCCTGCACCCACGCCTTCCTCCAGCCCGGTGCCCACCCTCTCTCCAGAGCAGCAGGAAATGTTGCAAGCATTCTCTACCCAGTCTGGCATGAACCTCGAGTGGTCCCAGAAGTGCCTTCAGGACAACAACTGGGACTACACCAGATCTGCCCAGGCCTTCACTCATCTCAAGGCCAAGGGCGAGATCCCAGAAGTGGCATTCATGAAGTGA
Amino sequence
MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDGDVAMSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK*