ENST00000016913.8 MS4A12
Information
- Transcript ID
- ENST00000016913.8
- Genome
- hg19
- Position
- chr11:60,260,251-60,274,903
- Strand
- +
- CDS length
- 804
- Amino acid length
- 268
- Gene symbol
- MS4A12
- Gene type
- protein-coding
- Gene description
- membrane spanning 4-domains A12
- Gene Entrez Gene ID
- 54860
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 60,260,251 | 60,260,301 |
2 | 60,264,786 | 60,265,067 |
3 | 60,268,518 | 60,268,655 |
4 | 60,269,456 | 60,269,512 |
5 | 60,271,174 | 60,271,290 |
6 | 60,274,201 | 60,274,311 |
7 | 60,274,493 | 60,274,903 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
2 | CDS | 60,264,792 | 60,265,067 |
3 | CDS | 60,268,518 | 60,268,655 |
4 | CDS | 60,269,456 | 60,269,512 |
5 | CDS | 60,271,174 | 60,271,290 |
6 | CDS | 60,274,201 | 60,274,311 |
7 | CDS | 60,274,493 | 60,274,597 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr11 | 60,492,778 | 60,507,430 | Link |
CDS sequence
ATGATGTCATCCAAGCCAACAAGCCATGCTGAAGTAAATGAAACCATACCCAACCCTTACCCACCAAGCAGCTTTATGGCTCCTGGATTTCAACAGCCTCTGGGTTCAATCAACTTAGAAAACCAAGCTCAGGGTGCTCAGCGTGCTCAGCCCTACGGCATCACATCTCCGGGAATCTTTGCTAGCAGTCAACCGGGTCAAGGAAATATACAAATGATAAATCCAAGTGTGGGAACAGCAGTAATGAACTTTAAAGAAGAAGCAAAGGCACTAGGGGTGATCCAGATCATGGTTGGATTGATGCACATTGGTTTTGGAATTGTTTTGTGTTTAATATCCTTCTCTTTTAGAGAAGTATTAGGTTTTGCCTCTACTGCTGTTATTGGTGGATACCCATTCTGGGGTGGCCTTTCTTTTATTATCTCTGGCTCTCTCTCTGTGTCAGCATCCAAGGAGCTTTCCCGTTGTCTGGTGAAAGGCAGCCTGGGAATGAACATTGTTAGTTCTATCTTGGCCTTCATTGGAGTGATTCTGCTGCTGGTGGATATGTGCATCAATGGGGTAGCTGGCCAAGACTACTGGGCCGTGCTTTCTGGAAAAGGCATTTCAGCCACGCTGATGATCTTCTCCCTCTTGGAGTTCTTCGTAGCTTGTGCCACAGCCCATTTTGCCAACCAAGCAAACACCACAACCAATATGTCTGTCCTGGTTATTCCAAATATGTATGAAAGCAACCCTGTGACACCAGCGTCTTCTTCAGCTCCTCCCAGATGCAACAACTACTCAGCTAATGCCCCTAAATAG
Amino sequence
MMSSKPTSHAEVNETIPNPYPPSSFMAPGFQQPLGSINLENQAQGAQRAQPYGITSPGIFASSQPGQGNIQMINPSVGTAVMNFKEEAKALGVIQIMVGLMHIGFGIVLCLISFSFREVLGFASTAVIGGYPFWGGLSFIISGSLSVSASKELSRCLVKGSLGMNIVSSILAFIGVILLLVDMCINGVAGQDYWAVLSGKGISATLMIFSLLEFFVACATAHFANQANTTTNMSVLVIPNMYESNPVTPASSSAPPRCNNYSANAPK*