ENST00000538490.3 FAM180B
Information
- Transcript ID
- ENST00000538490.3
- Genome
- hg19
- Position
- chr11:47,608,230-47,610,746
- Strand
- +
- CDS length
- 552
- Amino acid length
- 184
- Gene symbol
- FAM180B
- Gene type
- protein-coding
- Gene description
- family with sequence similarity 180 member B
- Gene Entrez Gene ID
- 399888
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 47,608,230 | 47,608,405 |
| 2 | 47,609,303 | 47,609,373 |
| 3 | 47,609,591 | 47,610,746 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 47,608,321 | 47,608,405 |
| 2 | CDS | 47,609,303 | 47,609,373 |
| 3 | CDS | 47,609,591 | 47,609,986 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 47,586,678 | 47,589,194 | Link |
CDS sequence
ATGGCTGCGACCCTGCAGTTCCTGGTTTGCCTGGTGGTAGCCATTTGTCTCCTCTCTGGTGTGACTACAACCCAGCCCCATGCAGGGCAGCCCATGGACAGCACCAGCGTGGGAGGTGGCCTGCAGGAGCCAGAGGCCCCGGAAGTGATGTTTGAGCTGCTCTGGGCTGGGCTGGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGATGAGGAACTAGCGTCCACACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCACTGAGCAGTGGCTGCAGCAGCTCCAGGACCTGCGGAAGGGGCCTCCTCTTAGCACTTGGGACTTTGAACATCTGCTCCTCACAGGCCTGTCCTGCGTCTACCGGCTCCACGCAGCTAGTGAGGCTGAGGAACGGGGCCGCTGGGCCCAGGTCTTCGCTCTCCTGGCACAGGAAACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCCAGGACCGGCCCCCTTCCCTGGGGTCCTGGGCCTCCATCCTTGACCCCTTCCCCTGA
Amino sequence
MAATLQFLVCLVVAICLLSGVTTTQPHAGQPMDSTSVGGGLQEPEAPEVMFELLWAGLELDVMGQLHIQDEELASTHPGRRLRLLLQHHVPSDLEGTEQWLQQLQDLRKGPPLSTWDFEHLLLTGLSCVYRLHAASEAEERGRWAQVFALLAQETLWDLCKGFCPQDRPPSLGSWASILDPFP*